🧬 gget enables efficient querying of genomic reference databases
Comprehensive Python client for the Uniprot REST API
UniProt Id Mapping through API
ProtVec can be used in protein interaction predictions, structure prediction, and protein data visualization.
PyMissense creates the pathogenicity plot and modified pdb as shown in the AlphaMissense paper for custom proteins.
A Python script to map PDB ID + chain ID to UniProt ID.
🧬 BioMCP — bioinformatics MCP server: 83 tools · 43 databases · PubMed/NCBI/BLAST/PDB/UniProt/enrichment · `pip install biomcp-server` · 生信 MCP 服务器
Web scraper for UniProt and iPTMnet database
Structural biology superpowers for AI coding agents: PyMOL, ChimeraX, AlphaFold DB, RCSB PDB, UniProt, and Rosetta workflows.
From taxonomic affiliations to annotated consensus proteomes using UniProt database.
Functional sequence annotation, metamorphism and multifunctionality research over proteins
Plant genomics MCP server — 50+ tools across 23 backends (Ensembl Plants, Phytozome, UniProt, AlphaFold DB, PDBe, InterPro, JASPAR, PANTHER, OrthoDB, AraGWAS, NCBI BLAST, Gramene, KEGG, STRING-DB, ATTED-II, BAR, …) + cross-source synthesis. stdio + Streamable-HTTP.
AI Agent wrappers for Life Sciences APIs (Open Targets, ChEMBL, UniProt). Accelerating drug discovery with Model Context Protocol (MCP) and FastMCP.
🧬 SeqStudio: Generative reasoning system for protein functional annotation
Tool for converting between various gene ids
Store the bioinformatic information in a python object given a Uniprot ID
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