All pull requests

Pull requests

• fix(website): date chikungunya announcement for 2 October rollout

  #1179·by corneliusroemer was merged Oct 1, 2026Contributor·

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• fix(website): date chikungunya announcement for 1 October rollout

  #1178·by corneliusroemer-agent was merged Oct 1, 2026Collaborator·

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• Update Loculus version to cbf764

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  #1177·by pathoplexus-bot was merged Oct 1, 2026Contributor·

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• Update Loculus version to cdcfec

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  #1176·by pathoplexus-bot was merged Oct 1, 2026Contributor·

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• chore(taxonomy): use NCBI taxonomy build 2026-09-01

  #1175·by corneliusroemer was merged Sep 29, 2026Contributor·

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• feat(website): update the date of CHIKV release

  #1174·by anna-parker was merged Sep 29, 2026Contributor·

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• Update Loculus version to 252763

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  #1173·by pathoplexus-bot was merged Sep 29, 2026Contributor·

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• Update Loculus version to c95869

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  #1172·by pathoplexus-bot was merged Sep 28, 2026Contributor·

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• docs: reword focal set requirements in restricted-use summary

  #1170·by theosanderson-agent was merged Sep 28, 2026Collaborator·

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• chore(config): remove collection device/method, sample received date and sequencing date from desired fields and metadata template

  #1168·by theosanderson-agent was merged Sep 25, 2026Collaborator·

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• Update Loculus version to 9af277

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  #1167·by pathoplexus-bot was merged Sep 25, 2026Contributor·

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• DONT MERGE: testing new example files

  #1165·by maverbiest was closed Sep 24, 2026Contributor·Draft·

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• feat: add embl annotation files, reprocess everything

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  #1164·by anna-parker was merged Sep 28, 2026Contributor·

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• Update Loculus version to 277b5c

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  #1163·by pathoplexus-bot was closed Sep 24, 2026Contributor·

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• Update Loculus version to 6ddf76

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  #1161·by pathoplexus-bot was merged Sep 22, 2026Contributor·

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• Fix lines running together in raw reads news post

  #1160·by maverbiest was merged Sep 22, 2026Contributor·

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• fix: remove annotations

  #1159·by anna-parker was merged Sep 22, 2026Contributor·

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• docs: bring the docs in line with raw reads being accepted

  #1158·by corneliusroemer was merged Sep 22, 2026Contributor·

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• Review suggestions for the raw reads news post

  #1157·by corneliusroemer-agent was merged Sep 21, 2026Collaborator·

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• Wastewater FAQ: raw reads are now accepted

  #1156·by corneliusroemer-agent was merged Sep 21, 2026Collaborator·

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• Update Loculus version to 2bfdee

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  #1155·by pathoplexus-bot was merged Sep 21, 2026Contributor·

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• Enable AWS S3 on ppx demo

  #1154·by tombch was merged Sep 21, 2026Contributor·

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• News post to announce raw reads

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  #1153·by maverbiest was merged Sep 21, 2026Contributor·

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• fix(ci): pin deacon index

  #1152·by anna-parker was merged Sep 18, 2026Contributor·

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• feat: turn on GC as bucket versioning is enabled

  #1151·by anna-parker was merged Sep 18, 2026Contributor·

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