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1. Commits on Dec 14, 2025

   • Refactor: fix SonarQube S1155 issues (#1079)

     Pasjonat90D

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2. Commits on Jan 3, 2025

   • Javadoc fix: all other errors in core module

     josemduarte

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   • Javadoc fix: html-like tag not allowed

     josemduarte

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3. Commits on Jun 12, 2024

   • Fix issue s1319 Declarations should use Java collection interfaces on biojava-core and dependencies

     jlerbsc

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4. Commits on May 15, 2024

   • Fix issue s1319 Declarations should use Java collection interfaces on biojava-core

     jlerbsc

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5. Commits on Apr 24, 2024

   • Use toURI instead of getFile which doesn't have file scheme

     cometbroom

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6. Commits on Mar 4, 2024

   • Replacing home-made copy by Files.copy. Other minor fixes

     josemduarte

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7. Commits on Jan 14, 2024

   • Added access to the iterable

     hilbertglm

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8. Commits on Jan 13, 2024

   • Removed the MagicNumber class after finding InputStreamProvider

     hilbertglm

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   • Before finding the InputStreamProvider

     hilbertglm

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9. Commits on Dec 4, 2023

   • Fixing gh workflow warning and failing test

     josemduarte

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10. Commits on Jan 30, 2023

    • Merge pull request #1046 from BulkSecurityGeneratorProjectV2/fix/JLL/temporary_file_local_information_disclosure

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      josemduarte

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11. Commits on Jan 26, 2023

    • Merge pull request #1024 from aalhossary/add_file_download_validation

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      aalhossary

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12. Commits on Dec 24, 2022

    • Adding placeholder for several common hashing algorithms

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      aalhossary

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    • Minor corrections

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      aalhossary

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13. Commits on Nov 18, 2022

    • vuln-fix: Temporary File Information Disclosure

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      JLLeitschuh

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      TeamModerne

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14. Commits on Oct 18, 2022

    • removed unused import

      

      jamesmorris

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      jamesmorris

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    • Changes to improve the testGithub942 test

      

      jamesmorris

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      jamesmorris

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15. Commits on Oct 12, 2022

    • updated test data and tests

      

      jamesmorris

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      jamesmorris

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    • updated the test data and tests

      

      jamesmorris

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      jamesmorris

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    • Updated test file

      

      jamesmorris

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      jamesmorris

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    • Changed the file used for testing to one whith a much smaller sequence

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      jamesmorris

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      jamesmorris

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    • added file to test for handling features containing joins

      

      jamesmorris

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      jamesmorris

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16. Commits on Oct 3, 2022

    • Removed getLocusName()

      

      jamesmorris

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      jamesmorris

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17. Commits on Jul 6, 2022

    • Added test for issue #886

      

      jamesmorris

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      jamesmorris

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18. Commits on Feb 22, 2022

    • Unit testing

      aalhossary

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19. Commits on Jan 5, 2022

    • Merge pull request #998 from richarda23/#944-testcoverage

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      josemduarte

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20. Commits on Jan 3, 2022

    • fixes #1008

      

      otter606

      authored and

      heuermh

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    • test MSA

      otter606

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    • remove duplicate generics

      otter606

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    • tidy up RNASeqTest

      otter606

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    • simplify generics in RNASequence

      otter606

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21. Commits on Jan 2, 2022

    • Strand unit test, taxonomyID unit test

      otter606

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    • Strand unit test

      otter606

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    • fix deprecated assertions

      otter606

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