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1. Commits on Dec 14, 2025

   • Refactor: fix SonarQube S1155 issues (#1079)

     Pasjonat90D

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2. Commits on Dec 8, 2025

   • Merge pull request #1119 from Pasjonat90D/fix/use-isempty-instead-of-size-#1079

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     josemduarte

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3. Commits on Nov 30, 2025

   • Fix #1079: Use isEmpty() instead of size() == 0

     Pasjonat90D

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4. Commits on Nov 21, 2025

   • Fix RSPEC-1940 boolean checks

     JayKamsu

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5. Commits on Jan 3, 2025

   • Javadoc fix: all other errors in core module

     josemduarte

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   • Javadoc fix: bad tags

     josemduarte

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   • Javadoc fix: html escaping

     josemduarte

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   • Javadoc fix: html-like tag not allowed

     josemduarte

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   • Javadoc fix: param fixes

     josemduarte

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   • Javadoc fix: <p>

     josemduarte

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6. Commits on Jul 22, 2024

   • Removing functionality that uses mmtf.rcsb.org, now deprecated

     josemduarte

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7. Commits on Jun 12, 2024

   • Fix issue s1319 Declarations should use Java collection interfaces on biojava-core and dependencies

     jlerbsc

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8. Commits on May 15, 2024

   • Fix issue s1319 Declarations should use Java collection interfaces on biojava-core

     jlerbsc

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9. Commits on Apr 24, 2024

   • Use toURI instead of getFile which doesn't have file scheme

     cometbroom

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10. Commits on Apr 23, 2024

    • Merge pull request #1091 from jlerbsc/S2293

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      josemduarte

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11. Commits on Apr 18, 2024

    • Fix sonar issue S2293 Replace the type specification in this constructor call with the diamond operator ('<>')

      jlerbsc

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12. Commits on Apr 1, 2024

    • fix container inefficiency in GenericFastaHeaderParser.java

      cinsttool

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13. Commits on Mar 6, 2024

    • Merge pull request #1086 from jlerbsc/master

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      josemduarte

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14. Commits on Mar 5, 2024

    • fix sonar issue 2629 Logging arguments should not require evaluation

      jlerbsc

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15. Commits on Mar 4, 2024

    • Typo

      josemduarte

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    • Replacing home-made copy by Files.copy. Other minor fixes

      josemduarte

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16. Commits on Feb 26, 2024

    • fix: issue #1081 Sonar S1132 Strings literals should be placed on the left side when checking for equality

      jlerbsc

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17. Commits on Jan 26, 2024

    • Missed a RuntimeException. Changed to UncheckedIOException

      hilbertglm

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    • Changed the version to 7.1.0-SNAPSHOT. Made changes per review.

      hilbertglm

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18. Commits on Jan 14, 2024

    • Added access to the iterable

      hilbertglm

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    • Added comments

      hilbertglm

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19. Commits on Jan 13, 2024

    • Removed the MagicNumber class after finding InputStreamProvider

      hilbertglm

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    • Before finding the InputStreamProvider

      hilbertglm

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20. Commits on Dec 4, 2023

    • Fixing gh workflow warning and failing test

      josemduarte

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21. Commits on Jun 30, 2023

    • Merge remote-tracking branch 'origin/master'

      josemduarte

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    • Init fix from sonar

      josemduarte

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    • Cast fix from sonar

      josemduarte

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    • Regex fix from sonar

      josemduarte

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    • Merge pull request #1067 from jlerbsc/master

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      josemduarte

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22. Commits on Jun 29, 2023

    • Review comment

      josemduarte

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