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Pacific Northwest National Laboratory
- United States
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10:58
(UTC -07:00) - fengsong.github.io
- https://orcid.org/0000-0003-3983-9009
- @SongZhimuFeng
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openfold-3 Public
Forked from aqlaboratory/openfold-3A fully open source biomolecular structure prediction model based on AlphaFold3
Python Apache License 2.0 UpdatedSep 23, 2026 -
molar Public
Forked from yesint/molarRepository for molar crate and its dependencies
Rust Artistic License 2.0 UpdatedSep 22, 2026 -
bindcraft2 Public
Forked from PacesaLab/BindCraft2Easy to use suite for designing a wide range of protein binder modalities.
Python Other UpdatedSep 21, 2026 -
dynamics Public
Forked from David-OConnor/dynamicsMolecular dynamics simluations
Rust MIT License UpdatedSep 20, 2026 -
chatmol-lab Public
Forked from ChatMol/chatmol-labOpen-source desktop research assistant for computational biology and protein design
TypeScript MIT License UpdatedSep 18, 2026 -
patinae Public
Forked from zmactep/patinaeA fast, programmable molecular viewer for research, scripting, and the web
Rust BSD 3-Clause "New" or "Revised" License UpdatedSep 18, 2026 -
rust-in-bioinformatics Public
Forked from sharkLoc/rust-in-bioinformaticsA collection of genomics software tools written in Rust
Python MIT License UpdatedSep 16, 2026 -
sage Public
Forked from lazear/sageProteomics search & quantification so fast that it feels like magic
Rust MIT License UpdatedSep 10, 2026 -
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proteomics-sample-metadata Public
Forked from bigbio/proteomics-sample-metadataSDRF: The Proteomics sample metadata: Standard for experimental design annotation in proteomics datasets
HTML GNU General Public License v2.0 UpdatedSep 10, 2026 -
NERDSS Public
Forked from JohnsonBiophysicsLab/NERDSSNonEquilibrium Reaction-Diffusion Self-assembly Simulator
C++ GNU General Public License v3.0 UpdatedSep 9, 2026 -
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elegant-chinese Public
Forked from Zhangyanbo/elegant-chinese雅正中文 skill:让 Claude 写出清通的现代汉语,诊断并修复翻译腔与官腔
UpdatedJul 19, 2026 -
statements Public
Forked from RILAB/statementsSuccessful Job Applications and Grants
Other UpdatedJul 17, 2026 -
seven-sketches-zh Public
Forked from Zhangyanbo/seven-sketches-zh《组合性七讲:应用范畴论导引》中文译本(基于 arXiv:1803.05316v3)
TeX Other UpdatedJul 14, 2026 -
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hpc-skills Public
Forked from Zhangyanbo/hpc-skillsSkills that teach AI coding agents (Claude Code etc.) to use university HPC clusters safely — deploy, submit, monitor SLURM jobs via SSH. Currently: Tufts. Contributions welcome.
TeX Other UpdatedJul 10, 2026 -
folddisco Public
Forked from steineggerlab/folddiscoFast indexing and search of discontinuous motifs in protein structures
Rust GNU General Public License v3.0 UpdatedJul 10, 2026 -
vibe-research-skill Public
Forked from Zhangyanbo/vibe-research-skillBibTeX Style MIT License UpdatedJul 10, 2026 -
cayman-his-elisa-opentrons-workflow Public
Forked from Arcadia-Science/cayman-his-elisa-opentrons-workflowAn Opentrons OT-2 workflow for Cayman Chemical His-tag detection ELISA kit
Jupyter Notebook MIT License UpdatedJun 10, 2026 -
easy-vibe Public
Forked from datawhalechina/easy-vibe💻 vibe coding 2026 | Your first modern Coding course for beginners to master step by step.
JavaScript UpdatedMay 27, 2026 -
confornets Public
Forked from aqlaboratory/confornetsLatents-based conformational control in OpenFold3.
Jupyter Notebook UpdatedMay 25, 2026 -
claude-code-learning-handbook Public
Forked from 603419608/claude-code-learning-handbookClaude Code learning handbook in Chinese and English
MIT License UpdatedMay 16, 2026 -
regvelo Public
Forked from theislab/regveloinferring regulatory cellular dynamics
Python BSD 3-Clause "New" or "Revised" License UpdatedMay 3, 2026 -
MetabolicDistribution Public
Forked from LennonLab/MetabolicDistributionR GNU General Public License v3.0 UpdatedApr 30, 2026 -
discuss-cli Public
Forked from codesoda/discuss-cliStop reviewing agent plans in the terminal — PR-style review for Markdown that Codex / Claude Code can reply to.
Rust UpdatedApr 29, 2026 -
BayesMCA Public
Forked from PNNL-Predictive-Phenomics/emllBayesian Metabolic Control Analysis Package
Jupyter Notebook GNU General Public License v2.0 UpdatedApr 24, 2026 -
MetaClaw Public
Forked from aiming-lab/MetaClaw🦞 Just talk to your agent — it learns and EVOLVES 🧬.
Python MIT License UpdatedApr 2, 2026 -




