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1. Commits on Aug 14, 2015

   • Merging from master to biojava-ffx integration branch.

     jacob-litman

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2. Commits on Aug 4, 2015

   • Updated POMs in preparation for hosting as separate Maven repository; a few comments and log messages also got slightly refactored. Everything seems ready for public Biojava-FFX integration (with t…

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     Jacob Litman

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   • Fix StructureToolsTest to pass according to changes

     lafita

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3. Commits on Aug 3, 2015

   • Crate Test for consistency in getting representative Atoms

     lafita

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4. Commits on Jul 29, 2015

   • Extended the interface-implementation paradigm to Bonds and SSBonds. Renamed chain.getParent() and chain.setParent() to chain.getStructure() and chain.setStructure() to deconflict with other APIs. …

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     Jacob Litman

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5. Commits on Jul 27, 2015

   • Reverting parser change: removing pure non-poly chains is a bad idea.

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     josemduarte

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6. Commits on Jun 25, 2015

   • [maven-release-plugin] prepare for next development iteration

     andreasprlic

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   • [maven-release-plugin] prepare release biojava-4.1.0

     andreasprlic

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7. Commits on Apr 28, 2015

   • Run development/addlicense.sh

     sbliven

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8. Commits on Apr 15, 2015

   • Adding long-running ECOD test. Must be run manually.

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     sbliven

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   • Allow single-residue ranges

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     sbliven

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9. Commits on Apr 2, 2015

   • Fixing issue introduced in 543d730: mmcif parser was not doing

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     josemduarte

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10. Commits on Mar 27, 2015

    • Removing additional newly deprecated methods

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      sbliven

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11. Commits on Mar 26, 2015

    • Reducing assumptions that structures are protein

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      sbliven

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12. Commits on Mar 17, 2015

    • Improving memory efficiency of EcodFactory

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      sbliven

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13. Commits on Mar 16, 2015

    • More ECOD format changes

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      sbliven

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    • First round of fixes to ECOD format

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      sbliven

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14. Commits on Mar 11, 2015

    • Merge branch 'patch' into minor

      sbliven

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    • Some #111

      josemduarte

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    • ECOD Improvements

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      sbliven

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15. Commits on Mar 10, 2015

    • ECOD improvements

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      sbliven

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    • Moving EcodInstallationTest to integrationtest package

      sbliven

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16. Commits on Feb 2, 2015

    • Prepare for next minor version

      sbliven

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17. Commits on Jan 30, 2015

    • [maven-release-plugin] prepare for next development iteration

      andreasprlic

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    • [maven-release-plugin] prepare release biojava-4.0.0

      andreasprlic

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    • Refactoring of all package names according to #245 #242 #240

      andreasprlic

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18. Commits on Jan 29, 2015

    • updating to new module names

      andreasprlic

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    • Ran Optimize Imports across the whole project.

      andreasprlic

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    • Major refactoring of package names in accordance with #245 #242 #240

      andreasprlic

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