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@Genentech

Genentech

Dedicated to pursuing groundbreaking science to discover and develop medicines

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  1. gReLU gReLU Public

    gReLU is a python library to train, interpret, and apply deep learning models to DNA sequences.

    Python 365 60

  2. SpatialAgent SpatialAgent Public

    A harness for spatial biology

    Python 214 27

  3. equifold equifold Public

    Official code repository for EquiFold: Protein Structure Prediction with a Novel Coarse-Grained Structure Representation

    Python 131 18

  4. gneprop gneprop Public

    GNEprop is a graph neural network-based model to predict antibacterial activity from molecular structures in virtual screening settings.

    Jupyter Notebook 49 6

  5. scallops scallops Public

    SCALLOPS (Scalable Library for Optical Pooled Screens) is a comprehensive Python package designed to streamline and scale the analysis of Optical Pooled Screens (OPS) for biological data.

    Python 16 4

  6. AssayBench AssayBench Public

    AssayBench: An Assay-Level Virtual Cell Benchmark for LLMs and Agents

    Python 13

Repositories

Showing 10 of 169 repositories
  • scallops Public

    SCALLOPS (Scalable Library for Optical Pooled Screens) is a comprehensive Python package designed to streamline and scale the analysis of Optical Pooled Screens (OPS) for biological data.

    Genentech/scallops's past year of commit activity
    Python 16 4 2 3 Updated Oct 2, 2026
  • gReLU Public

    gReLU is a python library to train, interpret, and apply deep learning models to DNA sequences.

    Genentech/gReLU's past year of commit activity
    Python 365 MIT 60 19 9 Updated Oct 2, 2026
  • rdborrow Public

    External Control Borrowing for Rare Disease Simulation and Analysis

    Genentech/rdborrow's past year of commit activity
    R 0 0 12 3 Updated Oct 1, 2026
  • jmpost Public
    Genentech/jmpost's past year of commit activity
    R 17 4 31 1 Updated Oct 1, 2026
  • midasHLA Public

    R package enabling statistical association analysis and using immunogenetic data transformation functions for HLA amino acid fine mapping, analysis of HLA evolutionary divergence as well as HLA-KIR interactions.

    Genentech/midasHLA's past year of commit activity
    R 14 MIT 8 11 1 Updated Oct 1, 2026
  • BiocDuckDB Public
    Genentech/BiocDuckDB's past year of commit activity
    R 5 0 1 0 Updated Sep 30, 2026
  • DuckDBArray Public
    Genentech/DuckDBArray's past year of commit activity
    R 0 0 0 0 Updated Sep 30, 2026
  • AssayBench Public

    AssayBench: An Assay-Level Virtual Cell Benchmark for LLMs and Agents

    Genentech/AssayBench's past year of commit activity
    Python 13 MIT 0 0 0 Updated Sep 30, 2026
  • AssayLoop Public

    Biology-in-the-loop: Amortized Adaptive Hit Discovery in CRISPR Screens

    Genentech/AssayLoop's past year of commit activity
    Python 5 MIT 0 0 0 Updated Sep 26, 2026
  • pinard Public

    Orchestration platform for autonomous AI coding agents — turns issues into reviewed merge requests across GitLab and GitHub, with a conductor/worker hierarchy, durable messaging, and persistent memory.

    Genentech/pinard's past year of commit activity
    Go 4 MIT 0 0 1 Updated Sep 25, 2026
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