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1. GenOT GenOT Public

   GenOT: Generative optimal transport enables spatiotemporal interpolation and generation in cross-platform spatial transcriptomics

   Jupyter Notebook 1

2. diff-amp diff-amp Public

   Diff-AMP: all-in-one antimicrobial peptide design with diffusion models and reinforcement learning: generation, identification, property prediction and optimization (Briefings in Bioinformatics, 2024)

   Python 19 4

3. SE-SSP SE-SSP Public

   SE-SSP: recognizing plant small secretory peptides with a feature correction strategy (Journal of Chemical Information and Modeling, 2023)

   Python

4. StableDNAm StableDNAm Public

   StableDNAm: stable and efficient DNA methylation prediction with adaptive feature correction learning (BMC Genomics, 2023)

   Python 1

5. awesome-spatial-transcriptomics awesome-spatial-transcriptomics Public

   A curated list of tools, foundation models, datasets and tutorials for spatial transcriptomics and single-cell analysis, ordered the way an analysis goes.

   40 1