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Correction for DNA contamination in genotype calling
Code for reproducing the experiments of the Sparse Rooted Neighbor Joining paper
Rust-based WebAssembly bindings to read and write Apache Parquet data
Adds the ability to have collaborative comments on anything in VSCode / Positron
Repository for the clone2vec python package
A collaborative WYSIWYG editor for Quarto, bridging the gap between reproducible research and seamless teamwork
An agentic skills framework & software development methodology that works.
Scripts and data used in "Title: Transposable Element Expression as a Molecular Linker of Transcriptomic States Associated with Induction Failure in Acute Myeloid Leukemia" paper
GFMBench-API offers a unified middleware that decouples genomic foundation model architectures from diverse tasks, standardizes data streams and metrics, & enables users to submit models through a …
GDM Science Skills to speed up agentic scientific workflows with better grounding and higher token efficiency. Integrate insights from AlphaGenome, AFDB, UniProt and 30+ other databases and tools.
BBTools: Official suite of fast, multithreaded bioinformatics tools for DNA/RNA analysis. BBMap aligner, BBDuk trimmer, BBMerge, and 90+ other tools. Actively maintained by Brian Bushnell.
Run Apple's SimpleFold model in Amazon HealthOmics: Nextflow, Dockerfile, and Terraform
Fast QR decomposition with efficient column update/downdate and lm()-style formula interface
vjcitn / 2026vjc
Forked from datasciencelabs/2025BST 260: Introduction to Data Science Fall 2025 Course Repository
A collection of AI agent skills relevant to analysis and development of R/Bioconductor packages + statistical and bioinformatic analysis
🎨 Toolkit for generating publication-quality plots for Cell, Nature and Science journals
A landing page for the hackathon event taking place after Bioc North America 2026 in Seattle, Washington (USA).