string-db

🧬 BioMCP — bioinformatics MCP server: 83 tools · 43 databases · PubMed/NCBI/BLAST/PDB/UniProt/enrichment · `pip install biomcp-server` · 生信 MCP 服务器

Extract, cluster and analyse gene expression patterns using GTEx data and STRING-db and Enrichr APIs

Protein-network proximity analysis for Parkinson's disease candidate prioritization using STRING and GTEx substantia nigra expression.

MCP server for STRING v12: protein–protein association networks, interaction partners, and functional enrichment analysis — as typed tools for LLM agents.

Build a protein-protein interaction network from STRING and rank hub genes by degree centrality (the CytoHubba idea).

AI-powered drug repurposing pipeline that federates live data across 8 biomedical databases in real time, ranks candidates via DeepSeek V4 LLM analysis, and visualizes target–drug–protein networks in an interactive 3D knowledge graph.

Sequence, domain and interaction-network analysis of SIGMAR1 (ALS16) against a custom BLAST database of 84 amyloid-associated proteins