Tool used to quantify extrachromosomal DNA (ecDNA) in metaphase images stained with DAPI and FISH probes.
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Jul 28, 2026 - Python
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dapi
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Predicting cell cycle stage from 3D single-cell nuclear-stained images
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Jun 2, 2025 - Python
Multichannel single-cell immunofluorescence analysis with brightfield-refined cell boundaries, nuclear/cytoplasmic quantification, and per-cell co-localization metrics
python numpy tiff image-processing scikit-image image-analysis quantification single-cell microscopy ome-tiff watershed cell-segmentation colocalization brightfield bioimage-analysis dapi immunofluorescence active-contours cytoplasm nuclear-segmentation
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Dec 12, 2025 - Python
DAPI nuclei counter with proliferation analysis
python bioinformatics microscopy edu proliferation dapi microscopy-images cell-counting microscopy-image-analysis
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Dec 19, 2025 - Python
Proposal-to-biomass microscopy pipeline for DAPI-like fluorescence images using high-recall proposal segmentation, crop annotation, local contour refinement, and contour-based biovolume estimation.
python opencv computer-vision image-segmentation microscopy biomass bioimage-analysis dapi fluorescence-imaging biovolume
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Aug 18, 2026 - Python
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