🍊 View the gene expression response to TNF and IL-17A with vanilla Javascript and HTML.
This is a guide for creating informative and good looking vulcano plots for highthropout biological experiments with R ggplot2
A Python 3 compatible version of the major features of metaseq, a framework for integrated analysis and plotting of ChIP/RIP/RNA/*-seq data
GGPlot2 Extension for Fixed-Length Axis
Publication-quality bioinformatics figures for RNA-seq: volcano, enrichment bubble, clustered heatmap. Nature/Cell/CN-core presets, CJK fonts, auto-generated Methods paragraphs.
Browser app that generates graphs from amino acid sequences and hydrophobicity scales
This repository showcases bioinformatics analysis and visualization results from an independent project for a scientific writing course, utilizing iDEP and a microarray dataset derived from NCBI GEO.
A Python workflow for taking chemicals, finding the genes they interact with, and mapping the communities of genetic interactions.
An ensemble of functions for easier and quicker preliminary microbiome analyses
Inter-sample analysis of SQANTI classifications
LAB-AID (Laboratory Automated Interrogation of Data): an interactive web application for visualization of multi-level data from biological experiments
gmx_wheel+ is a tool for analysing and visualizing the orientation of helical antimicobial peptides based on molecular dynamics simulations
Bu sayfada Biyoinformatik analizler ile ilgili eğitim materyalleri bulunmaktadır.
Local-first, browser-based phylogenetic tree viewer for Auspice JSON and Newick files, with rooted and unrooted layouts, metadata coloring, search, zoom, ladderization, and SVG export.
This repo contains my training materials for microbial bioinformatics
Volcano plot built over numpy, pandas and matplotlib
Ready-to-go Jupyter notebook for plotting AlphaFold-generated MSAs, per-residue pLDDT, and PAE.
Python Client Library for the G2P Portal API
summarize and visualize the genotypes categories per sample in a VCF file
Bioinformatics CLI tool for analysis and visualization
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