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Utrecht University
- Utrecht, Netherlands
- https://orcid.org/0000-0003-0732-545X
Stars
Easy to use suite for designing a wide range of protein binder modalities.
Ansible is a radically simple IT automation platform that makes your applications and systems easier to deploy and maintain. Automate everything from code deployment to network configuration to clo…
Fast Volume Alignment by Frequency-Marched Newton
A modern static site generator by the Material for MkDocs team
Structural analysis pipeline for filtering, validating, and visualizing AlphaFold2-multimer models of the Sec11A-signal peptide complex.
The repository of the WeatherGenerator project
modular Python packages for cryo-EM and cryo-ET
Image-processing software for cryo-electron microscopy
🍦Icecream: a self-supervised framework for cryo-ET reconstruction
BindCraft modified to make PyRosetta use and installation optional: no license needed
A transformer model for picking protein particles in cryo-EM images
Neural multiclass ab initio reconstruction for cryo-EM.
(sub-)Tomogram reconstruction, subtilt extraction for cryo-ET.
Image processing with a focus on CryoEM, CryoET and Structural Biology
AlphaFold 3 inference pipeline.
Live processing and real time reconstruction of cryo
A python library for replica exchange transition interface sampling with infinite swaps
Open source implementation of AlphaFold3
A Python package for extracting and simulating diffuse scattering of X-rays in protein crystals
Deep-learning position extraction from score maps
Automatic atomic model building program for cryo-EM maps



