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openauc-io Public
Open-source Python toolkit for ingesting, validating, plotting, generating and archiving analytical ultracentrifugation data.
Python Apache License 2.0 UpdatedOct 15, 2026 -
dataswamp-biosystems Public
Deterministic synthetic biotech data platform for generating governed organisations, metadata, scientific datasets, lineage and defects for testing data catalogues, governance platforms, AI agents …
Python MIT License UpdatedSep 19, 2026 -
bio-governance-lab Public
Governance-as-code for synthetic life-sciences data: typed, tested data-governance models in Python.
Python MIT License UpdatedSep 12, 2026 -
zarr-tree Public
Read-only Rust CLI for inspecting Zarr, OME-Zarr and SpatialData metadata locally, on S3 and over HTTP.
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scientific-data-contracts Public
Data contracts for reproducible computational biology datasets
Python Apache License 2.0 UpdatedAug 31, 2026 -
bio-run-crate Public
Validate and package reproducible computational biology analysis runs using RO-Crate.
Python Apache License 2.0 UpdatedAug 14, 2026 -
biodataset-scout Public
Evidence-backed discovery, qualification and acquisition intelligence for biomedical datasets.
Python Apache License 2.0 UpdatedAug 8, 2026 -
Validate the semantic correctness, metadata completeness, provenance and AI readiness of Cell Painting datasets represented in AnnData.
Python Apache License 2.0 UpdatedJul 26, 2026 -
ATHENA Public
Forked from mims-harvard/ATHENAATHENA-R1: AI agent for treatment reasoning over a biomedical tool universe
Python MIT License UpdatedJul 17, 2026 -
everything-claude-code Public
Forked from affaan-m/ECCThe agent harness performance optimization system. Skills, instincts, memory, security, and research-first development for Claude Code, Codex, Opencode, Cursor and beyond.
JavaScript MIT License UpdatedMay 9, 2026 -
OpenMythos Public
Forked from kyegomez/OpenMythosA theoretical reconstruction of the Claude Mythos architecture, built from first principles using the available research literature.
Python MIT License UpdatedApr 19, 2026 -
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career-ops Public
Forked from career-ops-hq/career-opsAI-powered job search system built on Claude Code. 14 skill modes, Go dashboard, PDF generation, batch processing.
JavaScript MIT License UpdatedApr 10, 2026 -
unsloth Public
Forked from unslothai/unslothUnsloth Studio is a web UI for training and running open models like Qwen3.5, Gemma 4, DeepSeek, gpt-oss locally.
Python Apache License 2.0 UpdatedApr 9, 2026 -
crush Public
Forked from charmbracelet/crushGlamourous agentic coding for all 💘
Go Other UpdatedApr 4, 2026 -
gemini-cli Public
Forked from google-gemini/gemini-cliAn open-source AI agent that brings the power of Gemini directly into your terminal.
TypeScript Apache License 2.0 UpdatedApr 4, 2026 -
RustQC Public
Forked from seqeralabs/RustQCFast genomics quality control tools for sequencing data, written in Rust.
Rust GNU General Public License v3.0 UpdatedApr 2, 2026 -
rewrites.bio Public
Forked from seqeralabs/rewrites.bioA manifesto for AI-assisted modernisation of bioinformatics software.
Astro MIT License UpdatedApr 2, 2026 -
ClawBio Public
Forked from ClawBio/ClawBio🦖 ClawBio — The first bioinformatics-native AI agent skill library. Local-first. Reproducible. Built on OpenClaw.
HTML MIT License UpdatedMar 27, 2026 -
awesome-opencode Public
Forked from awesome-opencode/awesome-opencodeA curated list of awesome plugins, themes, agents, projects, and resources for https://opencode.ai
JavaScript Creative Commons Zero v1.0 Universal UpdatedMar 21, 2026 -
AI-For-Beginners Public
Forked from microsoft/AI-For-Beginners12 Weeks, 24 Lessons, AI for All!
Jupyter Notebook MIT License UpdatedMar 21, 2026 -
claude-code-best-practice Public
Forked from shanraisshan/claude-code-best-practicepractice made claude perfect
HTML MIT License UpdatedMar 14, 2026 -
CellWhisperer Public
Forked from epigen/CellWhispererCellWhisperer bridges the gap between transcriptomics data and natural language, enabling intuitive interaction with scRNA-seq datasets
Jupyter Notebook GNU General Public License v3.0 UpdatedMar 8, 2026 -
anndata Public
Forked from scverse/anndataAnnotated data.
Python BSD 3-Clause "New" or "Revised" License UpdatedMar 6, 2026 -
tabby Public
Forked from Eugeny/tabbyA terminal for a more modern age
TypeScript MIT License UpdatedFeb 28, 2026 -
data-formulator Public
Forked from microsoft/data-formulator🪄 Create rich visualizations with AI
TypeScript MIT License UpdatedFeb 21, 2026 -
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mcmicro Public
Forked from labsyspharm/mcmicroMultiple-choice microscopy pipeline
Nextflow MIT License UpdatedFeb 16, 2026 -
easy_vitessce Public
Forked from vitessce/easy_vitessceConfigure Vitessce using existing Scverse plotting APIs
Python MIT License UpdatedFeb 5, 2026