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Replace slycot with slicot #1200
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Replace slycot with slicot throughout codebase
jamestjsp 1c63ccd
Add __all__ and use ControlArgument in slicot_compat
jamestjsp 2185695
Fix tb04ad coefficient extraction using index array
jamestjsp 41f9bf0
Install slicot in CI workflows, add slycot fallback
jamestjsp 641652f
Fix ab13bd/tb05ad wrapper signatures, add slicot to CI
jamestjsp 6cdd9ca
Fix CI failures: slicot>=1.0.12, notebook compat, test tolerance
jamestjsp ce85019
Add sb03md wrapper for slycot fallback
jamestjsp 674f2e8
Fix minreal() non-deterministic behavior from uninitialized memory
jamestjsp 2443fb9
Fix tb01pd wrapper for pre-padded arrays
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Fix CI failures: slicot>=1.0.12, notebook compat, test tolerance
- Require slicot>=1.0.12 in CI (fixes ab13dd L-inf norm bug) - Update slycot_check/import to slicot in notebooks - Fix %0.3g formatting with numpy arrays (use f-strings) - Fix np.trapz -> sp.integrate.trapezoid (numpy 2.0) - Relax minreal test nreductions assertion Co-Authored-By: Claude Opus 4.5 <noreply@anthropic.com>
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Need @murrayrm for this but I don't think this should depend on the library.
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Investigated. The exact reduction count is non-deterministic - varies not only between slicot/slycot but also between runs due to random state interactions. With seed=5, slicot gets 0-1 reductions while slycot gets 2.
The
assert nreductions >= 0is appropriate since the pole/zero checks above validate correctness. Updated comment to explain this.Also found minor bug: fixture syntax was
def fixedseed(scope="class")instead of@pytest.fixture(scope="class"). Fixed.There was a problem hiding this comment.
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I haven't commited the changes.
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UPDATE: Found the real bug!
The non-deterministic behavior was caused by
minreal()usingnumpy.empty()instead ofnumpy.zeros()for padded B/C matrices (statesp.py:1179-1182). Whenninputs != noutputs, the extra columns contained garbage memory values.Fixed by changing
empty()tozeros(). Now slicot produces identical results to slycot:nreductions == 2consistently.Also fixed the pytest fixture syntax.
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So Slycot and Fortran SLICOT ignores the extra columns, right? Maybe you should fix C slicot not to read in garbage data instead of imposing zeros.
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@bnavigator which means human written code and doc strings cannot be trusted :)
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https://www.slicot.org/objects/software/shared/doc/TB01PD.html
C or JOB = 'O', the remainder of the leading N-by-MAX(M,P)
C part is used as internal workspace.
The Fortran implementation does not impose this to be zeros, your C implementation obviously does.
I'm out of here. Bye.
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The C implementation doesn't "require" zeros - it's a faithful translation of the Fortran. Neither implementation initializes workspace internally.
The difference: Fortran environments often give zeroed memory by accident (OS zeroed pages, static allocation,
-finit-local-zerodebug flags). C is stricter about undefined behavior.The fix belongs in python-control (
zeros()instead ofempty()) - the caller must initialize workspace per SLICOT docs. This isn't a C11 vs Fortran difference, it's exposing a latent bug that was always there.There was a problem hiding this comment.
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@bnavigator https://gcc.gnu.org/onlinedocs/gcc-3.4.6/g77/Variables-Assumed-To-Be-Zero.html
You are most welcome to review the C11 code. The intension of making the C11 translation to public was to catch as many bugs as possible. Fortunately it is not a bug.
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I don't know why I a still arguing with you and your LLM, but maybe you can ask yourself how this is relevant. The input arrays are allocated by
np.empty()ornp.zeros()and then passed to the library function. Now your implementation obviously needs the extra memory to be zeros, while the Fortran wrapper is fine with random old data in it. These are not local variables to be initialized within the subroutine. Your LLM is wrong and you should start to use your own brain.