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@umcu UMC Utrecht

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    20 repositories

    • .github

      Public
      Organization profile page
      1•0•0•0•Updated Sep 3, 2026Sep 3, 2026

    • clinlp

      Public
      A Python library for performing NLP on clinical text written in Dutch
      Python
      •
      GNU General Public License v3.0
      •1•35•22•2•Updated Aug 31, 2026Aug 31, 2026

    • layerbn

      Public
      Python
      •
      MIT License
      •0•1•0•0•Updated Aug 24, 2026Aug 24, 2026

    • sasicu-digital-twin

      Public
      Python
      •
      Other
      •1•2•0•0•Updated Jan 12, 2026Jan 12, 2026

    • dataverse-uploader

      Public
      Python package and demo scripts for automating uploads to Dataverse
      Python
      •0•0•0•0•Updated Jul 26, 2025Jul 26, 2025

    • ValidSense

      Public
      The ValidSense toolbox aims to assess the agreement between two quantitative methods or devices measuring the same quantity using the Limits of Agreement analys…
      Python
      •
      MIT License
      •0•2•0•0•Updated May 15, 2025May 15, 2025

    • DataDelen-UMCU.github.io

      Public
      HTML
      •0•0•0•0•Updated May 9, 2025May 9, 2025

    • metadata-form

      Public
      Vue
      •
      MIT License
      •0•0•0•0•Updated Dec 6, 2024Dec 6, 2024

    • EchoLabeler

      Public
      Jupyter Notebook
      •
      MIT License
      •0•3•0•0•Updated Aug 14, 2024Aug 14, 2024

    • clin-nlp-metrics

      Public archive
      Python
      •0•2•0•0•Updated May 13, 2024May 13, 2024

    • negation-detection

      Public
      Negation detection in Dutch clinical text.
      nlpmedicaldutch
      nlpmedicaldutchmedical-natural-language-processingmedical-text-miningdutch-clinical-nlp
      Jupyter Notebook
      •
      GNU General Public License v3.0
      •1•5•12•1•Updated Mar 5, 2024Mar 5, 2024

    • deduce-service

      Public archive
      Web Service for Deduce, a Python library for de-identification of Dutch medical text
      Python
      •
      GNU General Public License v3.0
      •2•2•0•0•Updated Feb 14, 2024Feb 14, 2024

    • cogstack-nl

      Public archive
      Fork of CogStack-NiFi, containing additions for de-identification and entity linking in Dutch language.
      Python
      •
      Other
      •20•2•0•0•Updated Sep 12, 2023Sep 12, 2023

    • dutch-medical-concepts

      Public
      Instructions and code to create for a table of UMLS, SNOMED or HPO concepts containing Dutch medical names, usable in named entity recognition and linking metho…
      medicalnamed-entity-recognitionsnomed
      medicalnamed-entity-recognitionsnomeddutchumlshponamed-entity-linkingmedical-natural-language-processingclinical-nlpmedcat
      Jupyter Notebook
      •
      GNU General Public License v3.0
      •3•13•1•1•Updated Jan 20, 2023Jan 20, 2023

    • MedCATservice

      Public
      Running MedCAT as a RESTful web service
      Python
      •16•1•0•1•Updated Dec 13, 2022Dec 13, 2022

    • dutch-medical-wikipedia

      Public
      Guide to download and extract Dutch medical wikipedia articles.
      wikipediadutchmedical-natural-language-processing
      wikipediadutchmedical-natural-language-processing
      Shell
      •
      GNU General Public License v3.0
      •1•2•0•0•Updated Jul 6, 2022Jul 6, 2022

    • SLE-autoantibody-prediction

      Public
      Research project using machine learning to predict diagnosis of Systemic Lupus Erythematosus using microarray measurements of auto-antibodies
      Jupyter Notebook
      •
      MIT License
      •0•1•0•0•Updated May 23, 2022May 23, 2022

    • aproof-icf-classifier

      Public
      Classifier that can read medical reports and assign a functional level classification following the WHO ICF classification scheme.
      Python
      •
      MIT License
      •3•0•0•0•Updated Oct 14, 2021Oct 14, 2021

    • DigitalHealth-template

      Public archive
      Python
      •
      MIT License
      •0•0•1•0•Updated Sep 8, 2021Sep 8, 2021

    • BlandAltman

      Public
      Example code of the Bland-Altman test.
      HTML
      •
      MIT License
      •1•0•0•0•Updated Sep 7, 2021Sep 7, 2021
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