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@Genometric Genometric

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    19 repositories

    • MSPC

      Public
      Using combined evidence from replicates to evaluate ChIP-seq peaks
      analysisnext-generation-sequencingchip-seq
      analysisnext-generation-sequencingchip-seqpeakgenome-analysispeaksngs-analysisenriched-regionsoverlapping-peaksmspc
      C#
      •
      GNU General Public License v3.0
      •10•22•4•0•Updated Mar 14, 2026Mar 14, 2026

    • gatk-sv

      Public
      Python
      •
      BSD 3-Clause "New" or "Revised" License
      •85•0•0•6•Updated Feb 25, 2026Feb 25, 2026

    • rmspc

      Public
      R
      •0•0•0•0•Updated Mar 23, 2025Mar 23, 2025

    • hello-world-javascript-action

      Public
      JavaScript
      •1•0•0•0•Updated Jul 12, 2024Jul 12, 2024

    • test-action

      Public
      0•0•0•0•Updated Jun 3, 2024Jun 3, 2024

    • gatk-sv-dockstore

      Public
      A structural variation pipeline for short-read sequencing
      Python
      •
      BSD 3-Clause "New" or "Revised" License
      •85•0•0•0•Updated Nov 6, 2023Nov 6, 2023

    • TVQ

      Public
      Contains scripts to study the impact of publishing software to package management systems on their scholarly recognition.
      citationbioconductorbioconda
      citationbioconductorbiocondatoolshedbiotoolsscholarly-references
      C#
      •
      MIT License
      •1•1•0•4•Updated Dec 8, 2022Dec 8, 2022

    • BibitemParser

      Public
      Parses a LaTeX BibTeX bibitem to a C# object
      parserlatexbibtex
      parserlatexbibtexbibliographybibtexparserbibtex-entry
      C#
      •
      MIT License
      •4•4•0•0•Updated Feb 23, 2021Feb 23, 2021

    • GeUtilities

      Public
      Genome Utilities (GeUtilities) provides open-source building-blocks for genomic data analysis tools.
      parsergenomicsgenome-analysis
      parsergenomicsgenome-analysisbuilding-block
      C#
      •
      GNU General Public License v3.0
      •2•3•3•2•Updated Jun 2, 2020Jun 2, 2020

    • Annotations

      Public
      MIT License
      •0•0•0•0•Updated Nov 30, 2019Nov 30, 2019

    • mspc_validation

      Public
      Python
      •2•2•0•0•Updated Nov 28, 2019Nov 28, 2019

    • content

      Public
      Experimental repo of bio.tools content for augmentation with other sources of tool information
      36•1•0•0•Updated Nov 26, 2019Nov 26, 2019

    • Di4

      Public
      1D intervals incremental inverted index
      genomicsinverted-indexspatial-index
      genomicsinverted-indexspatial-indexindexing-enginetemporal-datagenomics-searchngs-dataindexing-queryingchip-seq-datadi4
      C#
      •
      GNU General Public License v3.0
      •2•2•0•0•Updated Jul 29, 2019Jul 29, 2019

    • MatrixToBeds

      Public
      C#
      •
      Apache License 2.0
      •0•0•0•0•Updated Jan 9, 2019Jan 9, 2019

    • Di4-legacy

      Public archive
      1D intervals incremental inverted index
      Python
      •
      GNU General Public License v3.0
      •0•0•0•0•Updated Jul 18, 2018Jul 18, 2018

    • CloudAuthz

      Public
      Implements means of authorization delegation on cloud-based resource providers without sharing credentials
      Python
      •
      GNU General Public License v3.0
      •1•0•0•0•Updated Feb 15, 2018Feb 15, 2018

    • GeMSE

      Public
      GenoMetric Space Explorer
      visualizationclusteringpattern-recognition
      visualizationclusteringpattern-recognitiongenome-analysis
      Java
      •
      GNU General Public License v3.0
      •2•1•0•0•Updated Dec 24, 2017Dec 24, 2017

    • MuSERA

      Public
      MuSERA: Multiple Sample Enriched Region Assessment
      C#
      •
      GNU General Public License v3.0
      •0•0•0•0•Updated Jul 26, 2017Jul 26, 2017

    • SimDataGen

      Public
      C#
      •
      GNU General Public License v3.0
      •0•0•0•0•Updated Jul 16, 2017Jul 16, 2017
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