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Internalized snapshots; random filenames for external snapshots #933

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Merged
dwhswenson merged 12 commits into from
Oct 14, 2020
Merged

Internalized snapshots; random filenames for external snapshots #933

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8ad72d2
Improvements to gmx engine tools
dwhswenson Jul 21, 2020
0761836
Modifications to external/gmx for parallelization
dwhswenson Jul 23, 2020
6f78c45
Add internalized snapshots (& some docstrings)
dwhswenson Aug 3, 2020
b66f5de
Add _InternalizedEngineProxy and tests
dwhswenson Aug 6, 2020
bd79890
Merge remote-tracking branch 'upstream/master' into gmx_updates
dwhswenson Sep 27, 2020
899029b
fix for py27
dwhswenson Sep 27, 2020
b2fdfad
missed one
dwhswenson Sep 27, 2020
55e2888
add some tests
dwhswenson Sep 29, 2020
e6c9943
more testing for gmx updates
dwhswenson Oct 1, 2020
f2a4e46
fix TestGroFileEngine for CI
dwhswenson Oct 1, 2020
29da5dc
add dict serialization cycle test for GroFileEng
dwhswenson Oct 1, 2020
0cb85b2
Update openpathsampling/engines/external_engine.py
dwhswenson Oct 14, 2020
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fix for py27
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@dwhswenson
dwhswenson committed Sep 27, 2020
commit 899029b3cfef1f75d1ea1baa931f08351cada958
2 changes: 1 addition & 1 deletion openpathsampling/engines/external_engine.py
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Expand Up @@ -91,7 +91,7 @@ class RandomStringFilenames(FilenameSetter):
"""
_allowed = 'abcdefghijklmnopqrstuvwxyz0123456789'
def __init__(self, length=8, allowed=None):
super().__init__()
super(RandomStringFilenames, self).__init__()
self.length = length
allowed = allowed if allowed is not None else self._allowed
self.allowed = np.array([a for a in allowed])
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