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A package to create simple 3D network visualizations on a brain.
Interactive and static 3D visualisation for functional brain mapping
A repository of neural manifold techniques described and compared in "Neural manifold analysis of brain circuit dynamics in health and disease"
The code for 2-step diffusion maps designed for 3D fMRI time series
Reproducible and Programmatic Human Neuroimaging Visualisations
A toolbox for quantitative MRI and in vivo histology using MRI (hMRI)
Neuroimaging analysis and visualization suite
🤖 Python examples of popular machine learning algorithms with interactive Jupyter demos and math being explained
Toolbox for segmentation and characterisation of transient connectivity
This project contains scripts that can be used to automate the download, processing, and clearing of HCP data. It is dependent on a free portion of Amazon Web Service (AWS), but is designed to run …
3D-QCNet : A method for DL based artifact detection in diffusion MRI scans
pipreqs - Generate pip requirements.txt file based on imports of any project. Looking for maintainers to move this project forward.
NeuroData's MRI to Graphs (m2g) - connectome estimation package and pipeline
Martin Lindquist's dynamic correlation toolboxes. Designed for fMRI analysis, useful for other applications too.
Source code for GNN-LSPE (Graph Neural Networks with Learnable Structural and Positional Representations), ICLR 2022
The following repository contains files to the Bayesian Causal Inference Toolbox.
Matlab and Python scripts for calculating functional coupling between time series data
Python library for arbitrary-precision floating-point arithmetic
TAPAS - Translational Algorithms for Psychiatry-Advancing Science
Biologically based neural network simulations of the brain written in Go with a 3D GUI powered by Cogent Core.
PyTorch implementation of spectral graph ConvNets, NeurIPS’16
Implementation of LEICA: Laplacian Eigenmaps for group ICA Decomposition of fMRI data