Query and download genome annotations

Sub-muscle volume tracker for Hevy, open source. Hevy tracks muscle groups coarsely ("chest", "shoulders"). HevyMap pulls in your workouts.

🐟 🍣 🍱 Highly-accurate & wicked fast transcript-level quantification from RNA-seq reads using selective alignment

Create abstraction masks for bioc objects that only unwrap necessary objects

A Rust library and command line tool for working with genomic ranges and their data.

Git repository for Fall Rotation Project code base.

Seurat meets tidyverse. The best of both worlds.

Single cell analysis in the browser

Perform genomic liftover

Aggregate results from bioinformatics analyses across many samples into a single report.

machine-readable file format for genomic library sequence and structure

upload big files to Zenodo using cURL, jq and bash

Take command of your set enrichment analyses.

genetic variant expressions, annotation, and filtering for great good.

Unlock iSEE for transcript-level visualization

List of software packages for multi-trait / multiple-trait / multivariate / high-dimensional GWAS

Ten great papers for wet lab biologists starting out in computational biology

Nanopore RNA-Seq data from the Singapore Nanopore-Expression Project

Convenience functions to evaluate reduced dimension representations in SingleCellExperiment objects

Explore design matrices interactively with R/Shiny

R code for fuzzy ROC visualization

TOP results by CONfident efFECT Sizes.

Light-weight Snakemake workflow for preprocessing and statistical analysis of RNA-seq data

Materials for Principles of Data Science BIOS 611

R/shiny interface for interactive visualization of data in SummarizedExperiment objects

A list of useful bioinformatics resources