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  • EEG-ExPy Public

    Forked from NeuroTechX/EEG-ExPy

    A collection of classic EEG experiments implemented with Python and Jupyter notebooks

    Python 1 BSD 3-Clause "New" or "Revised" License Updated Oct 6, 2026

  • vpjax Public

    Virtual Physiology in JAX — differentiable cerebrovascular models (complement to vbjax)

    Python 1 Updated Oct 6, 2026

  • neurojax Public

    JAX-accelerated electrophysiology analysis CLI with MNE, Diffrax, and osl-dynamics integration

    Python 4 MIT License Updated Oct 6, 2026

  • neurodebian Public

    Debian/NeuroDebian packaging for neuroimaging tools (LSL, ITK, ANTs, ...) ported from neurofedora

    Makefile Updated Oct 3, 2026

  • sbi4dwi Public

    Forked from AthenaEPI/dmipy

    The open source toolbox for reproducible diffusion MRI-based microstructure estimation

    Python MIT License Updated Sep 28, 2026

  • open-alliance-daq Public

    Open-source analog data acquisition + peak integration for a Waters Alliance e2695 / 2489 / 2424 HPLC stack (Raspberry Pi 4 + ADS1263)

    Python Other Updated Sep 25, 2026

  • fedora-afni-desktop-integration Public

    Desktop integration for AFNI on Fedora: menu entries, icons, MIME types, AppStream metainfo, file-manager launcher

    Makefile Other Updated Sep 23, 2026

  • nsg-agent-kit Public

    Run computational-neuroscience jobs on the Neuroscience Gateway (NSG/Expanse) against NEMAR datasets — an agent-oriented toolkit + platform findings.

    Python MIT License Updated Sep 23, 2026

  • vc2008-netpyne Public

    Vierling-Claassen et al. (2008) J Neurophysiol auditory-entrainment model: faithful NetPyNE/NEURON re-implementation of the GENESIS network + a differentiable JAX/Diffrax version of the paper's sim…

    meg eeg computational-neuroscience schizophrenia jax neuron-simulator netpyne
    Python MIT License Updated Sep 23, 2026

  • jacobian-lens Public

    Forked from anthropics/jacobian-lens

    Companion code for the global workspace interpretability paper

    Python Apache License 2.0 Updated Sep 22, 2026

  • societies-of-thought Public

    Does reasoning work by simulating a 'society of thought'? A replication of arXiv:2601.10825 finding its causal claim is a Countdown artifact — the same feature that gives +10 pts on Countdown costs…

    Python 1 1 Updated Sep 21, 2026

  • spinning-up-in-mech-interp Public

    Spinning Up in Mechanistic Interpretability — a controls-first, open-weights curriculum from vision circuits to the global workspace

    Python 1 Other Updated Sep 21, 2026

  • ato-qcm-monitor Public

    Vacuum QCM deposition-rate monitor (openQCM NEXT method: Teensy 4.1 + AD9851 + AD8302) for Hacker Fab sputter chambers, written in atopile; builds offline.

    Python MIT License Updated Sep 20, 2026

  • nanopath Public

    Forked from MedARC-AI/nanopath
    Python 1 Apache License 2.0 Updated Sep 19, 2026

  • planetary-stream Public

    Python Updated Sep 18, 2026

  • ato-heater-pid Public

    Heater + PID driver board for Hacker Fab tools, written in atopile. Builds offline; ESP32-C3, MCP9601 thermocouple, 10 A MOSFET or external SSR.

    Python MIT License Updated Sep 18, 2026

  • Xenarch_Project Public

    Forked from CSTR100/Xenarch_Project

    planetary anomaly detection model

    Python Updated Sep 17, 2026

  • fedora Public

    Forked from t2linux/fedora

    Patched linux kernel and packages for running Fedora on T2 macs.

    Shell Updated Sep 15, 2026

  • linux-t2-patches Public

    Forked from t2linux/linux-t2-patches

    Linux kernel patches to add support for T2 Macs

    Updated Sep 15, 2026

  • neurotechx-presentations Public

    Reusable NeuroTechX-inspired LaTeX Beamer theme and presentation drafts

    TeX MIT License Updated Sep 7, 2026

  • neurofedora Public

    Fedora COPR scientific stack — RPM spec files (mirror; primary at gitlab.com/morgan.hough/neurofedora)

    Shell Updated Aug 26, 2026

  • autonomic Public

    Emacs as a tool server for coding agents — the harness runs as an inferior process, Emacs serves its semantic layer (xref, project.el, Tramp) back as tools

    Emacs Lisp GNU General Public License v3.0 Updated Aug 16, 2026

  • hnn-jax Public

    Differentiable JAX reimplementation of the HNN forward model, validated against an HPC-generated hnn_core (NEURON) test oracle.

    Python MIT License Updated Aug 6, 2026

  • fedora-linear-algebra-mag-series Public

    8-part article series on the scientific linear algebra stack on Fedora — from BLAS/FlexiBLAS through GPU-accelerated solvers

    Updated Aug 3, 2026

  • controls-and-trajectories Public

    Publishing the null distributions and developmental trajectories interpretability papers rely on but rarely ship.

    Python 1 Updated Aug 1, 2026

  • tri-lens Public

    Do three interpretability instruments agree about the same activation? J-lens vs NLA vs SAE, with mismatch nulls and steering as ground truth.

    Python 1 Updated Aug 1, 2026

  • brain-fwi Public

    Python 1 1 Updated Jul 28, 2026

  • inferjax Public

    Amortized simulation-based inference and posterior calibration for any JAX simulator

    Python MIT License Updated Jul 26, 2026

  • biohub-starter Public

    Starter kit for the Kaggle Biohub Cell Tracking During Development competition: embryo-disjoint validation, measured findings, and negative results

    Python 1 1 Updated Jul 26, 2026

  • jwave Public

    Forked from ucl-bug/jwave

    A JAX-based research framework for differentiable and parallelizable acoustic simulations, on CPU, GPUs and TPUs

    Python GNU Lesser General Public License v3.0 Updated Jul 23, 2026