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A cool place to store your Hi-C

Python 247 62 Updated Oct 26, 2026

A comprehensive collection of Model Context Protocol (MCP) servers

TypeScript 968 1,565 Updated Oct 27, 2026
Jupyter Notebook 4 1 Updated Apr 24, 2026
TeX 6 8 Updated Mar 18, 2026

State-of-the-Art Deep Learning scripts organized by models - easy to train and deploy with reproducible accuracy and performance on enterprise-grade infrastructure.

Jupyter Notebook 14,870 3,400 Updated Aug 12, 2024

Bioconductor teaching and education committee

HTML 60 28 Updated Oct 25, 2026

List of software packages for multi-omics analysis

950 197 Updated Oct 26, 2026

R package to create, modify and visualize graphs with multiple layers.

HTML 45 5 Updated Feb 22, 2023

A curated collection of free resources to help the aspiring computational biologist learn about the R programming language.

31 8 Updated Nov 26, 2024

Continuous integration for R packages. πŸ”€ Automates testing βœ…, documentation website building πŸ“¦, & containerised deployment 🐳.

HTML 92 13 Updated Oct 27, 2026

Modular package for generation of sets of ranges representing the null hypothesis. These can take the form of bootstrapped ranges (bootRanges), or set of control ranges that are matched across one …

R 29 7 Updated Aug 20, 2026

A (continuously updated) collection of references to Hi-C data. Predominantly human/mouse Hi-C data, with replicates.

210 33 Updated Feb 27, 2026

Develop and host GitHub actions for Bioconductor

Dockerfile 11 4 Updated Apr 22, 2021

A curated list of awesome tools for R package development

HTML 217 28 Updated Feb 14, 2026

🐝 Awesome R and Python packages offering extended UI or server components for the web framework Shiny

R 1,693 186 Updated Oct 7, 2026

NextSeq specific bcl2fastq2 wrapper.

Python 57 10 Updated Apr 15, 2021

Workshop on measuring, analyzing, and visualizing the 3D genome with Hi-C data.

Jupyter Notebook 213 47 Updated May 19, 2018

A collection of tools for Hi-C data analysis

Python 655 138 Updated Oct 24, 2026

A curated list of nextflow based pipelines

635 94 Updated Jun 23, 2025

Meghna Hugo is a responsive, minimalist, lightweight, and fast loading one-page business theme built with HTML5/CSS3, Hugo, JavaScript, and JQuery.

HTML 474 1,184 Updated Jul 11, 2026

Omega is a landing page business theme powered by Hugo.

JavaScript 55 68 Updated Jul 12, 2026

Comprehensive list of color palettes available in R β€οΈπŸ§‘πŸ’›πŸ’šπŸ’™πŸ’œ

R 1,726 146 Updated Jun 1, 2026

A curated list of awesome network analysis resources.

R 4,138 644 Updated Aug 20, 2026

Very accurate color filters reconstruction tools based on 3D color LUTs

Python 186 19 Updated Sep 10, 2018

Unicode symbols for CLI applications, with fallbacks

R 84 2 Updated Nov 9, 2024

A list of scRNA-seq analysis tools

R 826 179 Updated Oct 26, 2026

Metagenomic binning based on Hi-C data

Python 30 10 Updated Oct 26, 2026

🌎 Extra Coordinate Systems, Geoms, Statistical Transformations & Scales for 'ggplot2'

R 690 101 Updated May 13, 2026

A curated list of awesome Machine Learning frameworks, libraries and software.

Python 74,675 15,690 Updated Oct 22, 2026

Community-curated list of software packages and data resources for single-cell, including RNA-seq, ATAC-seq, etc.

3,884 1,104 Updated Oct 27, 2026
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