Wf, doc, src, tests

sbillinge · Oct 2, 2024 · Oct 2, 2024 · Oct 2, 2024 · Oct 2, 2024 · Oct 2, 2024
commit cca6ea7a94e3a55d87b1b0d471cb8597a0992b73
diff --git a/.github/workflows/check-news-item.yml b/.github/workflows/check-news-item.yml
@@ -0,0 +1,12 @@
+name: Check for News
+
+on:
+  pull_request_target:
+    branches:
+    - main
+
+jobs:
+  build:
+    uses: Billingegroup/release-scripts/.github/workflows/_check-news-item.yml@v0
+    with:
+      project: diffpy.pdfmorph
diff --git a/.github/workflows/docs.yml b/.github/workflows/docs.yml
diff --git a/.github/workflows/main.yml b/.github/workflows/main.yml
diff --git a/.github/workflows/matrix-and-codecov-on-merge-to-main.yml b/.github/workflows/matrix-and-codecov-on-merge-to-main.yml
@@ -0,0 +1,21 @@
+name: CI
+
+on:
+  push:
+    branches:
+      - main
+  release:
+    types:
+      - prereleased
+      - published
+  workflow_dispatch:
+
+jobs:
+  coverage:
+    uses: Billingegroup/release-scripts/.github/workflows/_matrix-and-codecov-on-merge-to-main.yml@v0
+    with:
+      project: diffpy.pdfmorph
+      c_extension: false
+      headless: false
+    secrets:
+      CODECOV_TOKEN: ${{ secrets.CODECOV_TOKEN }}
diff --git a/.github/workflows/pre-commit.yml b/.github/workflows/pre-commit.yml
diff --git a/.github/workflows/publish-docs-on-release.yml b/.github/workflows/publish-docs-on-release.yml
@@ -0,0 +1,14 @@
+name: Build and Deploy Docs
+
+on:
+  release:
+    types:
+      - published
+  workflow_dispatch:
+
+jobs:
+  docs:
+    uses: Billingegroup/release-scripts/.github/workflows/_publish-docs-on-release.yml@v0
+    with:
+      project: diffpy.pdfmorph
+      c_extension: false
diff --git a/.github/workflows/tests-on-pr.yml b/.github/workflows/tests-on-pr.yml
@@ -0,0 +1,16 @@
+name: Tests on PR
+
+on:
+  push:
+    branches:
+      - main
+  pull_request:
+  workflow_dispatch:
+
+jobs:
+  validate:
+    uses: Billingegroup/release-scripts/.github/workflows/_tests-on-pr.yml@v0
+    with:
+      project: diffpy.pdfmorph
+      c_extension: false
+      headless: false
diff --git a/src/diffpy/pdfmorph/tests/__init__.py → tests/__init__.py b/src/diffpy/pdfmorph/tests/__init__.py → tests/__init__.py
diff --git a/src/diffpy/pdfmorph/tests/conftest.py → tests/conftest.py b/src/diffpy/pdfmorph/tests/conftest.py → tests/conftest.py
diff --git a/src/diffpy/pdfmorph/tests/debug.py → tests/debug.py b/src/diffpy/pdfmorph/tests/debug.py → tests/debug.py
diff --git a/src/diffpy/pdfmorph/tests/run.py → tests/run.py b/src/diffpy/pdfmorph/tests/run.py → tests/run.py
diff --git a/src/diffpy/pdfmorph/tests/test_morph_func.py → tests/test_morph_func.py b/src/diffpy/pdfmorph/tests/test_morph_func.py → tests/test_morph_func.py
diff --git a/src/diffpy/pdfmorph/tests/test_morphchain.py → tests/test_morphchain.py b/src/diffpy/pdfmorph/tests/test_morphchain.py → tests/test_morphchain.py
diff --git a/...ffpy/pdfmorph/tests/test_morphpdftordf.py → tests/test_morphpdftordf.py b/...ffpy/pdfmorph/tests/test_morphpdftordf.py → tests/test_morphpdftordf.py
diff --git a/...ffpy/pdfmorph/tests/test_morphrdftopdf.py → tests/test_morphrdftopdf.py b/...ffpy/pdfmorph/tests/test_morphrdftopdf.py → tests/test_morphrdftopdf.py
diff --git a/...py/pdfmorph/tests/test_morphresolution.py → tests/test_morphresolution.py b/...py/pdfmorph/tests/test_morphresolution.py → tests/test_morphresolution.py
diff --git a/src/diffpy/pdfmorph/tests/test_morphrgrid.py → tests/test_morphrgrid.py b/src/diffpy/pdfmorph/tests/test_morphrgrid.py → tests/test_morphrgrid.py
diff --git a/src/diffpy/pdfmorph/tests/test_morphscale.py → tests/test_morphscale.py b/src/diffpy/pdfmorph/tests/test_morphscale.py → tests/test_morphscale.py
diff --git a/src/diffpy/pdfmorph/tests/test_morphshape.py → tests/test_morphshape.py b/src/diffpy/pdfmorph/tests/test_morphshape.py → tests/test_morphshape.py
diff --git a/src/diffpy/pdfmorph/tests/test_morphsmear.py → tests/test_morphsmear.py b/src/diffpy/pdfmorph/tests/test_morphsmear.py → tests/test_morphsmear.py
diff --git a/...iffpy/pdfmorph/tests/test_morphstretch.py → tests/test_morphstretch.py b/...iffpy/pdfmorph/tests/test_morphstretch.py → tests/test_morphstretch.py
diff --git a/...diffpy/pdfmorph/tests/test_pdfmorphapp.py → tests/test_pdfmorphapp.py b/...diffpy/pdfmorph/tests/test_pdfmorphapp.py → tests/test_pdfmorphapp.py
diff --git a/src/diffpy/pdfmorph/tests/test_pdfmorphio.py → tests/test_pdfmorphio.py b/src/diffpy/pdfmorph/tests/test_pdfmorphio.py → tests/test_pdfmorphio.py
diff --git a/src/diffpy/pdfmorph/tests/test_pdfplot.py → tests/test_pdfplot.py b/src/diffpy/pdfmorph/tests/test_pdfplot.py → tests/test_pdfplot.py
diff --git a/src/diffpy/pdfmorph/tests/test_refine.py → tests/test_refine.py b/src/diffpy/pdfmorph/tests/test_refine.py → tests/test_refine.py
diff --git a/src/diffpy/pdfmorph/tests/test_tools.py → tests/test_tools.py b/src/diffpy/pdfmorph/tests/test_tools.py → tests/test_tools.py
diff --git a/tests/test_version.py b/tests/test_version.py
@@ -0,0 +1,10 @@
+"""Unit tests for __version__.py
+"""
+
+import diffpy.pdfmorph
+
+
+def test_package_version():
+    """Ensure the package version is defined and not set to the initial placeholder."""
+    assert hasattr(diffpy.pdfmorph, "__version__")
+    assert diffpy.pdfmorph.__version__ != "0.0.0"
diff --git a/...fpy/pdfmorph/tests/testdata/ni_qmax25.cgr → tests/testdata/ni_qmax25.cgr b/...fpy/pdfmorph/tests/testdata/ni_qmax25.cgr → tests/testdata/ni_qmax25.cgr
diff --git a/...h/tests/testdata/ni_qmax25_e17.5_p5.0.cgr → tests/testdata/ni_qmax25_e17.5_p5.0.cgr b/...h/tests/testdata/ni_qmax25_e17.5_p5.0.cgr → tests/testdata/ni_qmax25_e17.5_p5.0.cgr
diff --git a/...orph/tests/testdata/ni_qmax25_psize35.cgr → tests/testdata/ni_qmax25_psize35.cgr b/...orph/tests/testdata/ni_qmax25_psize35.cgr → tests/testdata/ni_qmax25_psize35.cgr
diff --git a/...ph/tests/testdata/ni_qmax25_qdamp0.01.cgr → tests/testdata/ni_qmax25_qdamp0.01.cgr b/...ph/tests/testdata/ni_qmax25_qdamp0.01.cgr → tests/testdata/ni_qmax25_qdamp0.01.cgr
diff --git a/...pdfmorph/tests/testdata/nickel_ss0.01.cgr → tests/testdata/nickel_ss0.01.cgr b/...pdfmorph/tests/testdata/nickel_ss0.01.cgr → tests/testdata/nickel_ss0.01.cgr
diff --git a/...pdfmorph/tests/testdata/nickel_ss0.02.cgr → tests/testdata/nickel_ss0.02.cgr b/...pdfmorph/tests/testdata/nickel_ss0.02.cgr → tests/testdata/nickel_ss0.02.cgr
diff --git a/...tests/testdata/nickel_ss0.02_eps0.002.cgr → tests/testdata/nickel_ss0.02_eps0.002.cgr b/...tests/testdata/nickel_ss0.02_eps0.002.cgr → tests/testdata/nickel_ss0.02_eps0.002.cgr
diff --git a/...saving/succinct/Morph_Reference_Table.txt → ...saving/succinct/Morph_Reference_Table.txt b/...saving/succinct/Morph_Reference_Table.txt → ...saving/succinct/Morph_Reference_Table.txt
diff --git a/...data/testsaving/succinct/Morphs/mwt_a.cgr → ...data/testsaving/succinct/Morphs/mwt_a.cgr b/...data/testsaving/succinct/Morphs/mwt_a.cgr → ...data/testsaving/succinct/Morphs/mwt_a.cgr
diff --git a/...data/testsaving/succinct/Morphs/mwt_b.cgr → ...data/testsaving/succinct/Morphs/mwt_b.cgr b/...data/testsaving/succinct/Morphs/mwt_b.cgr → ...data/testsaving/succinct/Morphs/mwt_b.cgr
diff --git a/...data/testsaving/succinct/Morphs/mwt_c.cgr → ...data/testsaving/succinct/Morphs/mwt_c.cgr b/...data/testsaving/succinct/Morphs/mwt_c.cgr → ...data/testsaving/succinct/Morphs/mwt_c.cgr
diff --git a/...data/testsaving/succinct/Morphs/mwt_d.cgr → ...data/testsaving/succinct/Morphs/mwt_d.cgr b/...data/testsaving/succinct/Morphs/mwt_d.cgr → ...data/testsaving/succinct/Morphs/mwt_d.cgr
diff --git a/...data/testsaving/succinct/Morphs/mwt_e.cgr → ...data/testsaving/succinct/Morphs/mwt_e.cgr b/...data/testsaving/succinct/Morphs/mwt_e.cgr → ...data/testsaving/succinct/Morphs/mwt_e.cgr
diff --git a/...data/testsaving/succinct/Morphs/mwt_f.cgr → ...data/testsaving/succinct/Morphs/mwt_f.cgr b/...data/testsaving/succinct/Morphs/mwt_f.cgr → ...data/testsaving/succinct/Morphs/mwt_f.cgr
diff --git a/...saving/succinct/single_succinct_morph.cgr → ...saving/succinct/single_succinct_morph.cgr b/...saving/succinct/single_succinct_morph.cgr → ...saving/succinct/single_succinct_morph.cgr
diff --git a/...tsaving/verbose/Morph_Reference_Table.txt → ...tsaving/verbose/Morph_Reference_Table.txt b/...tsaving/verbose/Morph_Reference_Table.txt → ...tsaving/verbose/Morph_Reference_Table.txt
diff --git a/...tdata/testsaving/verbose/Morphs/mwt_a.cgr → ...tdata/testsaving/verbose/Morphs/mwt_a.cgr b/...tdata/testsaving/verbose/Morphs/mwt_a.cgr → ...tdata/testsaving/verbose/Morphs/mwt_a.cgr
diff --git a/...tdata/testsaving/verbose/Morphs/mwt_b.cgr → ...tdata/testsaving/verbose/Morphs/mwt_b.cgr b/...tdata/testsaving/verbose/Morphs/mwt_b.cgr → ...tdata/testsaving/verbose/Morphs/mwt_b.cgr
diff --git a/...tdata/testsaving/verbose/Morphs/mwt_c.cgr → ...tdata/testsaving/verbose/Morphs/mwt_c.cgr b/...tdata/testsaving/verbose/Morphs/mwt_c.cgr → ...tdata/testsaving/verbose/Morphs/mwt_c.cgr
diff --git a/...tdata/testsaving/verbose/Morphs/mwt_d.cgr → ...tdata/testsaving/verbose/Morphs/mwt_d.cgr b/...tdata/testsaving/verbose/Morphs/mwt_d.cgr → ...tdata/testsaving/verbose/Morphs/mwt_d.cgr
diff --git a/...tdata/testsaving/verbose/Morphs/mwt_e.cgr → ...tdata/testsaving/verbose/Morphs/mwt_e.cgr b/...tdata/testsaving/verbose/Morphs/mwt_e.cgr → ...tdata/testsaving/verbose/Morphs/mwt_e.cgr
diff --git a/...tdata/testsaving/verbose/Morphs/mwt_f.cgr → ...tdata/testsaving/verbose/Morphs/mwt_f.cgr b/...tdata/testsaving/verbose/Morphs/mwt_f.cgr → ...tdata/testsaving/verbose/Morphs/mwt_f.cgr
diff --git a/...stsaving/verbose/single_verbose_morph.cgr → ...stsaving/verbose/single_verbose_morph.cgr b/...stsaving/verbose/single_verbose_morph.cgr → ...stsaving/verbose/single_verbose_morph.cgr
diff --git a/...rph/tests/testdata/testsequence/a_210K.gr → tests/testdata/testsequence/a_210K.gr b/...rph/tests/testdata/testsequence/a_210K.gr → tests/testdata/testsequence/a_210K.gr
diff --git a/...rph/tests/testdata/testsequence/b_204K.gr → tests/testdata/testsequence/b_204K.gr b/...rph/tests/testdata/testsequence/b_204K.gr → tests/testdata/testsequence/b_204K.gr
diff --git a/...rph/tests/testdata/testsequence/c_198K.gr → tests/testdata/testsequence/c_198K.gr b/...rph/tests/testdata/testsequence/c_198K.gr → tests/testdata/testsequence/c_198K.gr
diff --git a/...rph/tests/testdata/testsequence/d_192K.gr → tests/testdata/testsequence/d_192K.gr b/...rph/tests/testdata/testsequence/d_192K.gr → tests/testdata/testsequence/d_192K.gr
diff --git a/...rph/tests/testdata/testsequence/e_186K.gr → tests/testdata/testsequence/e_186K.gr b/...rph/tests/testdata/testsequence/e_186K.gr → tests/testdata/testsequence/e_186K.gr
diff --git a/...rph/tests/testdata/testsequence/f_180K.gr → tests/testdata/testsequence/f_180K.gr b/...rph/tests/testdata/testsequence/f_180K.gr → tests/testdata/testsequence/f_180K.gr
diff --git a/...rph/tests/testdata/testsequence/g_174K.gr → tests/testdata/testsequence/g_174K.gr b/...rph/tests/testdata/testsequence/g_174K.gr → tests/testdata/testsequence/g_174K.gr
diff --git a/...sts/testdata/testsequence_serialfile.json → tests/testdata/testsequence_serialfile.json b/...sts/testdata/testsequence_serialfile.json → tests/testdata/testsequence_serialfile.json