A Python toolkit for analyzing animal tracking data generated by SLEAP (Social LEAP Estimates Animal Poses). This pipeline provides automated analysis and visualization of multi-animal pose trackin…

pySolo video extension

A Package for Plotting Insect Electrical Penetration Graph Signals in R.

The public facing version of the Tango Snakemake workflow.

TimeTrial is an interactive application for optimizing the design and analysis of Transcriptomic times-series data in Circadian Biology research.

TimeCycle is a topology inspired method for the detection of cycling transcripts in circadian biology research.

Add Day/Night Patterns to ggplot2 Plots

Code for controlling an IoT relay (i.e. smart outlet) with a DS3231 RTC synced to UTC for precise lighting control.

Arduino library for BSEC to simplify integration into compatible platforms. To report issues, go to https://community.bosch-sensortec.com/t5/Bosch-Sensortec-Community/ct-p/bst_community

Arduino Library for Maxim Integrated DS3232 and DS3231 Real-Time Clocks

Automatically set the hours, minutes and seconds in your project when compiling/uploading!

DataMap is a browser-based app for visualizing data using heatmaps, PCA plots, and t-SNE plots.

Colorado State University LaTeX Thesis/Dissertation Template

A fork of Jeelab's fantastic RTC Arduino library

Circadian rhythm analysis and visualisation in R

An application to find and visualize circadian and non-circadian trends in multi-omics time course data using model selection and joint modeling.

An application to navigate and understand amplitude change categories for circadian rhythms with gene ontologies, using ECHO output.

An application to find and visualize circadian rhythms in time course data using extended harmonic oscillators.

Introduction to GPU Acceleration on Alpine

Python tool for converting files and office documents to Markdown.

Critical difference diagram with Wilcoxon-Holm post-hoc analysis.

vim-be-good is a nvim plugin designed to make you better at Vim Movements.

Control program for circadian experiments.

FFmpeg Assembly Language Lessons

Machine Learning for Automated Electrical Penetration Graph Analysis of Aphid Feeding Behavior: Accelerating Research on Insect-Plant Interactions

Daniel's fork of "Machine Learning for signal processing on insects' behaviors" by the HySon Lab.

(FLIR monochrome cam optimized) Python package for streaming video from multiple cameras to disk. Features real-time compression and debayering using FFmpeg.