Skip to content
Navigation Menu
Sign in
Appearance settings
Platform
AI CODE CREATION
GitHub Copilot
Write better code with AI
GitHub Copilot app
Direct agents from issue to merge
MCP Registry
Integrate external tools
DEVELOPER WORKFLOWS
Actions
Automate any workflow
Codespaces
Instant dev environments
Issues
Plan and track work
Code Review
Manage code changes
Code Quality
Enforce quality at merge
APPLICATION SECURITY
GitHub Advanced Security
Find and fix vulnerabilities
Code security
Secure your code as you build
Secret protection
Stop leaks before they start
EXPLORE
Why GitHub
Documentation
Blog
Changelog
Marketplace
View all features
Solutions
BY COMPANY SIZE
Enterprises
Small and medium teams
Startups
Nonprofits
BY USE CASE
App Modernization
DevSecOps
DevOps
CI/CD
View all use cases
BY INDUSTRY
Healthcare
Financial services
Manufacturing
Government
View all industries
View all solutions
Resources
EXPLORE BY TOPIC
AI
Software Development
DevOps
Security
View all topics
EXPLORE BY TYPE
Customer stories
Events & webinars
Ebooks & reports
Business insights
GitHub Skills
SUPPORT & SERVICES
Documentation
Customer support
Community forum
Trust center
Partners
View all resources
Open Source
COMMUNITY
GitHub Sponsors
Fund open source developers
PROGRAMS
Security Lab
Maintainer Community
GitHub Stars
Archive Program
REPOSITORIES
Topics
Trending
Collections
Enterprise
ENTERPRISE SOLUTIONS
Enterprise platform
AI-powered developer platform
AVAILABLE ADD-ONS
GitHub Advanced Security
Enterprise-grade security features
Copilot for Business
Enterprise-grade AI features
Premium Support
Enterprise-grade 24/7 support
Pricing
Search
/
Sign in
Sign up
Appearance settings
You signed in with another tab or window.
Reload
to refresh your session.
You signed out in another tab or window.
Reload
to refresh your session.
You switched accounts on another tab or window.
Reload
to refresh your session.
Dismiss alert
{{ message }}
biojava
biojava
Repository navigation
Code
Issues
69
(69)
Pull requests
2
(2)
Actions
Security and quality
Insights
More
items
Files
Expand file tree
java9
Breadcrumbs
biojava
/
biojava-structure
/
src
/
main
/
java
/
org
/
biojava
/
nbio
/
structure
/
Copy path
Directory actions
More options
More options
Directory actions
More options
More options
Latest commit
History
History
History
java9
Breadcrumbs
biojava
/
biojava-structure
/
src
/
main
/
java
/
org
/
biojava
/
nbio
/
structure
/
Copy path
Top
Folders and files
Name
Name
Last commit message
Last commit date
parent directory
..
align
align
asa
asa
basepairs
basepairs
cath
cath
cluster
cluster
contact
contact
domain
domain
ecod
ecod
geometry
geometry
io
io
jama
jama
math
math
quaternary
quaternary
rcsb
rcsb
scop
scop
secstruc
secstruc
symmetry
symmetry
validation
validation
xtal
xtal
AminoAcid.java
AminoAcid.java
AminoAcidImpl.java
AminoAcidImpl.java
Atom.java
Atom.java
AtomImpl.java
AtomImpl.java
AtomIterator.java
AtomIterator.java
AtomPositionMap.java
AtomPositionMap.java
AugmentedResidueRange.java
AugmentedResidueRange.java
Author.java
Author.java
BioAssemblyIdentifier.java
BioAssemblyIdentifier.java
Bond.java
Bond.java
BondImpl.java
BondImpl.java
BondType.java
BondType.java
Calc.java
Calc.java
Chain.java
Chain.java
ChainImpl.java
ChainImpl.java
DBRef.java
DBRef.java
Element.java
Element.java
ElementType.java
ElementType.java
EntityInfo.java
EntityInfo.java
EntityType.java
EntityType.java
ExperimentalTechnique.java
ExperimentalTechnique.java
Group.java
Group.java
GroupIterator.java
GroupIterator.java
GroupType.java
GroupType.java
HetatomImpl.java
HetatomImpl.java
JournalArticle.java
JournalArticle.java
Model.java
Model.java
Mutator.java
Mutator.java
NucleotideImpl.java
NucleotideImpl.java
PDBCrystallographicInfo.java
PDBCrystallographicInfo.java
PDBHeader.java
PDBHeader.java
PDBRecord.java
PDBRecord.java
PDBStatus.java
PDBStatus.java
PassthroughIdentifier.java
PassthroughIdentifier.java
ResidueNumber.java
ResidueNumber.java
ResidueRange.java
ResidueRange.java
ResidueRangeAndLength.java
ResidueRangeAndLength.java
SeqMisMatch.java
SeqMisMatch.java
SeqMisMatchImpl.java
SeqMisMatchImpl.java
Site.java
Site.java
StandardAminoAcid.java
StandardAminoAcid.java
Structure.java
Structure.java
StructureException.java
StructureException.java
StructureIO.java
StructureIO.java
StructureIdentifier.java
StructureIdentifier.java
StructureImpl.java
StructureImpl.java
StructureTools.java
StructureTools.java
SubstructureIdentifier.java
SubstructureIdentifier.java
URLIdentifier.java
URLIdentifier.java
package-info.java
package-info.java
View all files
You can’t perform that action at this time.