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Fix #703: Recover from empty structure files in PDB_CACHE_DIR - #774

Merged

sbliven merged 11 commits into

biojava:bugfixes-4.2from

Jun 18, 2018

Merged

Fix #703: Recover from empty structure files in PDB_CACHE_DIR#774
sbliven merged 11 commits into
biojava:bugfixes-4.2from
sbliven:fix703

Commits on Jun 4, 2018
- Improving CathInstallation logging
  sbliven
  committed
  5c1a335
- Add test for #703
  sbliven
  committed
  4785d57
Commits on Jun 8, 2018
- Support initial comments in MMCif files (e.g. those generated by PyMOL)
  sbliven
  committed
  c3cec91
- Make tests for #703 fail with an assertion
  sbliven
  committed
  b207d34
- Re-download empty structure or chemical component structures
  sbliven
  committed
  6ea9ae7
- Set and restore the ChemCompGroupFactory singleton
  sbliven
  committed
  62fb2a4
Commits on Jun 12, 2018
- Incorporating suggestions from @josemduarte
  sbliven
  committed
  f5b325f
Commits on Jun 14, 2018
- Add GlobalsHelper class to manage our global state
  sbliven
  committed
  13f267c
- Fix NullPointer when restoring global state
  sbliven
  committed
  c1c3c30
Commits on Jun 15, 2018
- Fix test failure due to PDB change
  sbliven
  committed
  0c10a2e
Commits on Jun 18, 2018
- Revert fix for mmcif files without auth_seq_id column
  sbliven
  committed
  08ab3e1