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biojava
biojava
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Contact calculation performance tweaks
- #1147
#1147
Merged
josemduarte
merged 4 commits into
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biojava/biojava:master
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jd/contact-perf
biojava/biojava:jd/contact-perf
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Sep 4, 2026
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Contact calculation performance tweaks
#1147
josemduarte
merged 4 commits into
master
biojava/biojava:master
from
jd/contact-perf
biojava/biojava:jd/contact-perf
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Commits
Commits on Aug 27, 2026
Avoiding sqrt when unnecessary. About 8% performance gain
josemduarte
committed
9cd05a8
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Use int arrays for performance. Gain is ~ 1.5x
josemduarte
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c95285c
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Commits on Aug 28, 2026
Presize the AtomContactSet HashMap. Performance gain is ~ 1.2x
josemduarte
committed
51ae015
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Commits on Sep 3, 2026
Docs
josemduarte
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e73ce56
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