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1. Commits on Mar 14, 2018

   • Merge pull request #749 from josemduarte/removeV4deprecations

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   • Add license to all files

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2. Commits on Mar 12, 2018

   • Removing deprecations from v4

     josemduarte

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3. Commits on Mar 9, 2018

   • Added moved note and cleaned up unused variable and some docs

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4. Commits on Mar 7, 2018

   • Merging sequencing module into genome module as per #536

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5. Commits on Oct 3, 2017

   • Updating genenames.org url to https

     josemduarte

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6. Commits on Aug 15, 2017

   • improvements

     valasatava

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   • Setter for chromosome coordinate systems: 0-based, 1-based

     valasatava

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   • CDS length calculation bug fix

     valasatava

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7. Commits on Apr 11, 2017

   • Merge branch 'master' of https://github.com/valasatava/biojava

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8. Commits on Apr 7, 2017

   • Work with assemble hg19 or hg37 keyword

     valasatava

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   • Get CDS ranges patch

     valasatava

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9. Commits on Apr 5, 2017

   • Get CDS ranges patch

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10. Commits on Apr 4, 2017

    • TwoBitFile geneAssembly fix

      valasatava

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    • A class to download .2bit file

      valasatava

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    • Refactoring FileDownload util to be a part of biojava-core project

      valasatava

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11. Commits on Apr 3, 2017

    • proxy for convertDNAtoProteinSequence

      valasatava

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12. Commits on Mar 28, 2017

    • .2bit parser facade added

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13. Commits on Mar 23, 2017

    • Fix for orientation value: compare to Character, not to String

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      Yana Valasatava

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14. Commits on Mar 21, 2017

    • Changes required for Extracting protein sequence for genetic positions #642 pull request

      

      Yana Valasatava

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15. Commits on Mar 20, 2017

    • Class to extract protein sequence from genetic positions

      

      Yana Valasatava

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16. Commits on Feb 24, 2017

    • Chromosome mapping tool patch for converting a genomic position to the position on mRNA for the genes leaving on the forward strand

      

      Yana Valasatava

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17. Commits on Feb 23, 2017

    • Bugfix: chromosome mapping tool returns -1 if position falls outside coding region on the forward strand

      

      Yana Valasatava

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18. Commits on Sep 21, 2016

    • Merge branch 'master' of github.com:biojava/biojava

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      andreasprlic

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    • tiny javadoc improvements

      andreasprlic

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19. Commits on Aug 25, 2016

    • More tests for issue #355

      andviane

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20. Commits on Aug 24, 2016

    • Cleanup

      andviane

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    • Fix 355

      andviane

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21. Commits on Aug 10, 2016

    • Merge branch 'bugfixes-4.2'

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      sbliven

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22. Commits on Jul 29, 2016

    • new utility class for chromosome mappings.

      andreasprlic

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    • new utility class for chromosome mappings.

      andreasprlic

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    • new utility class for chromosome mappings.

      andreasprlic

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23. Commits on Jul 27, 2016

    • #534 moving the getHTML methods out of BioJava

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    • #534 renaming method names, according to @joseduarte 's comments

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    • #534 addressing @joseduarte 's comments

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