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1. Commits on Aug 30, 2024

   • Add additional error checks to QuatSymmetry functions

     sbliven

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   • Fix CE-Symm bug relating to short subunits.

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     sbliven

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   • Fix some typos

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     sbliven

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2. Commits on Aug 9, 2024

   • Merge pull request #1098 from josemduarte/issue1096

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     josemduarte

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3. Commits on Jul 22, 2024

   • Removing functionality that uses mmtf.rcsb.org, now deprecated

     josemduarte

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4. Commits on Jul 19, 2024

   • Bringing back alignPairs option, should fix #1096

     josemduarte

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   • Some cleanups

     josemduarte

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5. Commits on Jun 12, 2024

   • Fix issue s1319 Declarations should use Java collection interfaces on biojava-core and dependencies

     jlerbsc

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6. Commits on Apr 18, 2024

   • Fix sonar issue S2293 Replace the type specification in this constructor call with the diamond operator ('<>')

     jlerbsc

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7. Commits on Mar 6, 2024

   • Merge pull request #1086 from jlerbsc/master

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     josemduarte

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   • Merge pull request #1085 from josemduarte/miscfixes

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8. Commits on Mar 5, 2024

   • fix sonar issue 2629 Logging arguments should not require evaluation

     jlerbsc

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9. Commits on Mar 4, 2024

   • Merge pull request #1083 from josemduarte/parseEsmCifFix

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     josemduarte

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   • Replacing home-made copy by Files.copy. Other minor fixes

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10. Commits on Mar 2, 2024

    • Better with ternary if

      josemduarte

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    • Be more lenient with some missing atom_site fields

      josemduarte

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11. Commits on Feb 26, 2024

    • fix: issue #1081 Sonar S1132 Strings literals should be placed on the left side when checking for equality

      jlerbsc

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12. Commits on Jan 8, 2024

    • Changed the URLs to the mirrors from http to https. Changed the name of the URL path to reflect a change in the v2 naming.

      hilbertglm

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13. Commits on Dec 29, 2023

    • Updated to Jakarta JAXB and Java 17

      hilbertglm

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14. Commits on Jun 30, 2023

    • Merge remote-tracking branch 'origin/master'

      josemduarte

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    • Try-with from sonar

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15. Commits on Jun 27, 2023

    • Sonar S2129 Constructors should not be used to instantiate 'String', 'BigInteger', 'BigDecimal' and primitive-wrapper classes (Issue #1066)

      jlerbsc

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16. Commits on Jun 21, 2023

    • Second fix for sonar rule 's1130' throws declarations should not be superfluous. This fix is specific to constructor declarations.

      jlerbsc

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17. Commits on Jun 2, 2023

    • Cleanup

      josemduarte

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18. Commits on Jun 1, 2023

    • Merge pull request #1062 from jlerbsc/master

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      josemduarte

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19. Commits on May 24, 2023

    • Improvements from review comments

      josemduarte

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20. Commits on May 21, 2023

    • Fix Sonar S1130 throws declarations should not be superfluous

      jlerbsc

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21. Commits on May 12, 2023

    • Fixing empty seqres groups for cif files with no _entity

      josemduarte

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    • Fixing empty seqres groups for pdb files with not seqres

      josemduarte

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22. Commits on May 11, 2023

    • Handling nulls in descriptions

      josemduarte

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23. Commits on May 10, 2023

    • Writing out entity info in CIF

      josemduarte

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24. Commits on May 7, 2023

    • Sonar S4973 '==' and '!=' should not be used when 'equals' is overridden #1052

      

      Pavan Kumar, Thummuru

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25. Commits on Apr 16, 2023

    • Sonar S4973 '==' and '!=' should not be used when 'equals' is overridden #1052

      tmrpavan

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26. Commits on Apr 6, 2023

    • Refactoring : Adding Static constants for NUCLEOTIDE_BACKBONE_ATOMS and AMINOACID_BACKBONE_ATOMS

      

      Sreejith Nair

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27. Commits on Apr 5, 2023

    • Refactoring : Changes to refactor isPureTranslation method to eliminate complex conditional smell

      

      Sreejith Nair

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