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An open-source, clean-room reimplementation of Microsoft Word in pure Rust

Rust 16,341 4,461 Updated Oct 27, 2026

Code to train and analyze multi-region data-constrained RNNs and perform Current-Based Decomposition (CURBD)

MATLAB 66 22 Updated Jun 9, 2026

RNA sequencing analysis pipeline using STAR, RSEM, HISAT2 or Salmon with gene/isoform counts and extensive quality control.

Nextflow 1,400 909 Updated Oct 26, 2026

Turn any AI agent into an AI Scientist. The #1 Agent Skills library for science, used by 250,000+ scientists worldwide. 177 ready-to-use validated skills plus 100+ scientific databases covering bio…

Python 54,939 4,843 Updated Oct 26, 2026

Knowledge structures for Multimodal Models

Jupyter Notebook 4 6 Updated Jan 9, 2026

Neuroimaging in Python FMRI analysis package

Python 419 147 Updated Dec 24, 2024

QC and cell type assignment for patch-seq transcriptomics data

HTML 27 4 Updated May 3, 2024

Python scripts that supplement the Coursera Computational Neuroscience course by the University of Washington

Jupyter Notebook 159 63 Updated Jun 20, 2017

Applied Computational Genomics Course at UU: Spring 2020

HTML 1,132 246 Updated Apr 5, 2024

AWS for Bioinformatics Researchers

Jupyter Notebook 198 45 Updated Jul 17, 2025

Academic CVs that you can emulate

Shell 581 53 Updated Apr 16, 2026

🎓 Academic portfolio that boosts citations. AI generates pages, you own as Markdown. BibTeX auto-import, Jupyter, LaTeX, slides, visual block editor — free to host forever. 学术主页,AI 生成,Markdown 拥有 👇

Jupyter Notebook 5,082 6,419 Updated Oct 25, 2026

BRAID is a department within Genentech dedicated to advancing biological and clinical sciences through artificial intelligence.

233 9 Updated Aug 13, 2025

Hone computational biology skills by re-enacting Figure 1 of modern biology papers

Jupyter Notebook 277 52 Updated Jul 25, 2024

published papers with a lot of data

76 13 Updated Apr 5, 2025

ChIP-seq analysis notes from Ming Tang

Python 854 305 Updated Aug 5, 2024

📺 Discover the latest machine learning / AI courses on YouTube.

26 5 Updated Nov 26, 2023

Primer3 is a command line tool to select primers for polymerase chain reaction (PCR).

C 2 Updated Oct 23, 2019

Multiomix platform source code

TypeScript 8 2 Updated Oct 26, 2026

RNAseq analysis notes from Ming Tang

Python 1,098 325 Updated Nov 15, 2021

resources for learning bioinformatics

1,691 274 Updated Jan 8, 2025

This is something I have decided to do to make something good come out of the current covid situation. Here I will put the publicly available source code of drawing specific figures each day which …

R 12 3 Updated Sep 6, 2021