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1. bgcflow bgcflow Public

   Snakemake workflow for the analysis of biosynthetic gene clusters across large collections of genomes (pangenomes)

   Python 55 15

2. chatBGC chatBGC Public

   Ask questions about biosynthetic gene clusters in your genome dataset using Retrieval-Augmented Generation (RAG) from a BGCFlow run.

   Python 3 2

3. bgcflow_dbt-duckdb bgcflow_dbt-duckdb Public

   An ELT framework based on DBT and DuckDB to process BGCFlow output tables

   Shell 2 1

4. bgcflow_wrapper bgcflow_wrapper Public

   A snakemake wrapper and utility tools command line interface for BGCFlow.

   Python 2 2

5. AbsPresTree AbsPresTree Public

   Forked from OmkarSaMo/AbsPresTree

   Create a phylogenetic tree with an absence/presence matrix of biosynthetic gene clusters

   Python 1

6. snakemake-UmetaFlow snakemake-UmetaFlow Public

   Created for testing the metabolomics pipeline through snakemake

   Python 1 1