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@FredHutch

Fred Hutch Cancer Center

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  1. Oncoscape Oncoscape Public

    a web application to apply/develop analysis tools for Molecular and Clinical data

    JavaScript 177 43

  2. SEACR SEACR Public

    SEACR: Sparse Enrichment Analysis for CUT&RUN

    Shell 123 49

  3. motuz motuz Public

    Motuz - A web based infrastructure for large scale data movements between on-premise and cloud

    JavaScript 115 14

  4. wiki wiki Public

    SciWiki: Collective KnowledgeBase for Scientific Data and Use

    SCSS 45 45

  5. proxmox-tools proxmox-tools Public

    prox command line interface for proxmox and other tools and customizations

    Python 43 5

  6. Galeano-Nino-Bullman-Intratumoral-Microbiota_2022 Galeano-Nino-Bullman-Intratumoral-Microbiota_2022 Public

    Analysis code used in Galeano Nino et al., Impact of Intratumoral Microbiota on Spatial and Cellular Heterogeneity in human cancer. 2022

    Python 42 8

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Showing 10 of 683 repositories
  • wdl-unit-tests Public

    Collection of simple WDL's for use in unit testing of WDL-centric software such as PROOF

    FredHutch/wdl-unit-tests's past year of commit activity
    Python 1 MIT 1 21 1 Updated Oct 25, 2026
  • codex-perplexity-adapter Public

    Local Responses API adapter for using Codex with the Perplexity Agent API

    FredHutch/codex-perplexity-adapter's past year of commit activity
    Python 2 MIT 0 0 4 Updated Oct 23, 2026
  • tfcb_2026 Public

    MCB 536: Tools for Computational Biology (2026)

    FredHutch/tfcb_2026's past year of commit activity
    Jupyter Notebook 7 16 0 0 Updated Oct 23, 2026
  • interop-nf Public

    InterOp QC Reporting - Nextflow

    FredHutch/interop-nf's past year of commit activity
    Python 0 0 0 0 Updated Oct 23, 2026
  • GDSCNsoilsites Public

    Homepage for BioDIGS Project. Learn about the project and download data.

    FredHutch/GDSCNsoilsites's past year of commit activity
    R 1 MIT 1 10 0 Updated Oct 22, 2026
  • wiki Public

    SciWiki: Collective KnowledgeBase for Scientific Data and Use

    FredHutch/wiki's past year of commit activity
    SCSS 45 45 65 8 Updated Oct 16, 2026
  • VISCtemplates Public

    Tools for creating polished and reproducible reports at VISC

    FredHutch/VISCtemplates's past year of commit activity
    R 11 1 26 6 Updated Oct 14, 2026
  • VISCfunctions Public
    FredHutch/VISCfunctions's past year of commit activity
    R 10 4 17 4 Updated Oct 14, 2026
  • DPR2 Public

    DPR2 - DataPackageR2

    FredHutch/DPR2's past year of commit activity
    R 2 0 4 3 Updated Oct 14, 2026
  • annzarro Public Forked from settylab/annzarro

    Zarr-based AnnData Visualization Tool

    FredHutch/annzarro's past year of commit activity
    JavaScript 0 MIT 1 0 0 Updated Oct 12, 2026
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