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1. Commits on Mar 2, 2024

   • Update titration_curve_fit.py

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   • Update running_titration_curve.py for python 3

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2. Commits on Jan 9, 2020

   • Make wanda.py Python 3-compatible

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3. Commits on Jul 27, 2017

   • A few updates.

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4. Commits on Oct 29, 2015

   • Small tweaks

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5. Commits on Jul 29, 2015

   • Add support for non-fixed-format input

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   • Get rid of unused variable.

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   • improve comments.

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   • Merge branch 'master' of https://github.com/swails/JmsScripts

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   • Still ugly, but add some indentation to make the intent a little clearer...

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6. Commits on Dec 29, 2014

   • Update FindSaltbridge.py to use cpptraj instead of ptraj and to correct the

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7. Commits on Jun 18, 2014

   • Improve CUDA detection.

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   • Add a BMRB STAR file parser from the BMRB website.

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8. Commits on Mar 25, 2014

   • Fix get_restarts.py (not really useful, anyway) and Moviemaker1_0.tcl for the

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9. Commits on Mar 20, 2014

   • Add wanda the fish in Python

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10. Commits on Oct 15, 2013

    • import sys

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    • Add an option to print out data from plot_refep_convergence instead of plotting.

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11. Commits on Oct 3, 2013

    • Improve max/min.

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12. Commits on Sep 30, 2013

    • Replace maxmin.py with better alternatives.

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13. Commits on Sep 25, 2013

    • Fix getPDB.sh

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    • Add a script to automagically download PDB files and fix up rdb.py

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14. Commits on Sep 18, 2013

    • Allow rdb to use numpy if available.

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    • Discard the source code present in the Amber repository. It's becoming a pain to

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    • Add RDB class for manipulating RDB files (tab-delimited database files)

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15. Commits on Jul 23, 2013

    • Add missing file.

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16. Commits on Jun 17, 2013

    • Updates:

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17. Commits on Jun 15, 2013

    • Fix titration_curve_fit.py... ??

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18. Commits on Jun 6, 2013

    • Have amber email stats also get the number of CUDA-related emails.

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19. Commits on May 22, 2013

    • Improvements.

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    • FINALLY! Calculate FEs inside plot_refep_convergence.py so we can combine

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    • Add a script to adjust the reference energies.

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20. Commits on May 21, 2013

    • Big updates to everything.

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21. Commits on May 13, 2013

    • Add support for TYR and fix CYS.

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22. Commits on May 1, 2013

    • kde() -> use_kde()

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23. Commits on Apr 24, 2013

    • Update mdoutanalyzer code for arbitrary data sets.

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