Issues

• AlignmentViewer hangs for empty/single-sequence MSAs (instead of throwing an error)

  help wantedwontfix
  sanderlab/alignmentviewer#56 · Filter by author BernhoferM opened on Apr 1, 2021
  2

• Make EVCouplings Ellipses into Circles

  sanderlab/alignmentviewer#47 · Filter by author cannin opened on Dec 13, 2019
  1

• Describe Limitations for UMAP Plot

  sanderlab/alignmentviewer#46 · Filter by author cannin opened on Dec 10, 2019
  2

• Add example files for "upload annotations" and "load couplings"

  sanderlab/alignmentviewer#43 · Filter by author cannin opened on Dec 3, 2019
  3

  

• Image view not generated on certain browsers

  sanderlab/alignmentviewer#35 · Filter by author thomashopf opened on May 24, 2019

• Stats view: “calculate” link could be made more obvious.

  sanderlab/alignmentviewer#32 · Filter by author rocreguant opened on Jan 10, 2019

• Image view: “apply” button could be made more obvious.

  sanderlab/alignmentviewer#31 · Filter by author rocreguant opened on Jan 10, 2019

• Cluster the pairwise identity matrix

  sanderlab/alignmentviewer#30 · Filter by author rocreguant opened on Jan 10, 2019

• When the alignment sorting is changed change the pairwise distance matrix

  sanderlab/alignmentviewer#29 · Filter by author rocreguant opened on Jan 10, 2019

• generate a tree view from the distance matrix

  sanderlab/alignmentviewer#28 · Filter by author rocreguant opened on Jan 10, 2019

• show labels on hover of the x and y protein.

  sanderlab/alignmentviewer#27 · Filter by author rocreguant opened on Jan 10, 2019
  1

• link stats view and msa view: activate the calculate button after user has modified the msa in msa view

  sanderlab/alignmentviewer#26 · Filter by author rocreguant opened on Jan 10, 2019

• Consider the image view mutations be colored by amino acid as well as reference sequence

  sanderlab/alignmentviewer#25 · Filter by author rocreguant opened on Jan 10, 2019

• Create a user manual on the front page

  sanderlab/alignmentviewer#24 · Filter by author rocreguant opened on Jan 10, 2019

• Sequence conservation not the same as the sequences

  sanderlab/alignmentviewer#23 · Filter by author rocreguant opened on Jan 10, 2019

• Add example for custom weight and couplings

  sanderlab/alignmentviewer#22 · Filter by author rocreguant opened on Jan 10, 2019
  2

• Allow to change the lead sequence

  sanderlab/alignmentviewer#18 · Filter by author rocreguant opened on Feb 9, 2018

• Focus alignment based on the lead sequence

  sanderlab/alignmentviewer#17 · Filter by author rocreguant opened on Feb 9, 2018

• Add labels for the stats view

  sanderlab/alignmentviewer#14 · Filter by author rocreguant opened on Dec 28, 2017

• The circular phylogeny tree

  sanderlab/alignmentviewer#12 · Filter by author rocreguant opened on Dec 28, 2017

• Merge MutationAssessor code specificity residue viewing

  sanderlab/alignmentviewer#11 · Filter by author rocreguant opened on Dec 28, 2017

• Update libraries

  sanderlab/alignmentviewer#5 · Filter by author rocreguant opened on Jul 7, 2017
  1

• Add a method to update the species list

  sanderlab/alignmentviewer#4 · Filter by author rocreguant opened on Jul 7, 2017
  1