Issues

• Describe sparse_data Option

  documentation
  sanderlab/CellBox#59 · Filter by author cannin opened on Aug 25, 2023
  1

  

• Cell Viability (and Other Activity Node) Values

  question
  sanderlab/CellBox#58 · Filter by author cannin opened on Jul 27, 2023
  1

  

• Transformation for Perturbation Strengths

  question
  sanderlab/CellBox#57 · Filter by author cannin opened on Jul 27, 2023
  

• Numerical instability between Tensorflow and Pytorch

  bug
  sanderlab/CellBox#56 · Filter by author Mustardburger opened on Jul 22, 2023
  2

  

• Best practices for using CellBox on different datasets

  help wanted
  sanderlab/CellBox#55 · Filter by author Mustardburger opened on Jul 22, 2023
  1

  

• Questions about train.py

  help wanted
  sanderlab/CellBox#54 · Filter by author Mustardburger opened on Jul 22, 2023
  5

  

• Explain the format of the expr_index.txt in the README

  documentation
  sanderlab/CellBox#52 · Filter by author cannin opened on Jun 30, 2023
  

• self.train_y0 not found when setting model to LinReg

  bug
  sanderlab/CellBox#50 · Filter by author Mustardburger opened on Jun 21, 2023
  

• Inconsistent drug indexing in loo_label.csv, expr_index.txt, and --drug_index argument

  help wanted
  sanderlab/CellBox#48 · Filter by author Mustardburger opened on Jun 8, 2023
  

• Rewrite kernel.py in Pytorch and Add Tests

  enhancement
  sanderlab/CellBox#46 · Filter by author cannin opened on May 23, 2023 · Prepares for the conversion from tensorflow to pytorch
  

• Add Tests for Dataset Partitioning Code

  enhancement
  sanderlab/CellBox#45 · Filter by author cannin opened on May 23, 2023 · Prepares for the conversion from tensorflow to pytorch
  

• Give Better Documentation for Testing

  enhancement
  sanderlab/CellBox#44 · Filter by author cannin opened on May 23, 2023 · Prepares for the conversion from tensorflow to pytorch
  

• Usage discussion

  sanderlab/CellBox#17 · Filter by author abhinavgudipati opened on Feb 18, 2021
  6