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Copy pathCheckAxis.ipf
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306 lines (270 loc) · 7.97 KB
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#pragma TextEncoding = "MacRoman"
#pragma rtGlobals=3 // Use modern global access method and strict wave access.
// Menu item for easy execution
Menu "Macros"
Submenu "Spatial Analysis"
"Check Axes", ProcessAll()
End
End
Function ProcessAll()
DataLoader()
AxisChecker()
End
//This function loads all the the waves from different Igor pxps in a directory
Function DataLoader()
// make a wave to colour the p1,c and p2 points (r, g and b)
Make/O/N=(3,4) colorwave=0
colorwave[][3] = 1
colorwave[0][0] = 1
colorwave[1][1] = 1
colorwave[2][2] = 1
NewDataFolder/O/S root:data
String expDiskFolderName,expDataFolderName
String FileList, ThisFile, wList, killList, wName
Variable FileLoop, nWaves, i
NewPath/O/Q/M="Please find disk folder" ExpDiskFolder
if (V_flag!=0)
DoAlert 0, "Disk folder error"
Return -1
endif
PathInfo /S ExpDiskFolder
ExpDiskFolderName=S_path
FileList=IndexedFile(expDiskFolder,-1,".pxp")
Variable nFiles=ItemsInList(FileList)
for (FileLoop = 0; FileLoop < nFiles; FileLoop += 1)
ThisFile=StringFromList(FileLoop, FileList)
expDataFolderName=ReplaceString(".pxp",ThisFile,"") //get rid of .pxp
LoadData /L=1/O/P=expDiskFolder/T=$expDataFolderName ThisFile
//
SetDataFolder $expDataFolderName
wList=WaveList("vec_*",";","")
nWaves=ItemsInList(wList)
Make/FREE/N=(1,3) gapw=NaN
for (i = 0; i < nWaves; i += 1)
wName = StringFromList(i,wList)
Wave w0 = $wName
Concatenate/NP=0 {gapw}, $wName // add gap row
endfor
Concatenate/O/NP=0/KILL wList, ThreeDVecWave
// Get rid of excess waves
killList = waveList("vec_*",",","") + WaveList("elli_*",",","")
KillWaves/Z killList
// Now make *_ax wave
wName = "root:" + expDataFolderName + "_ax"
Make/O/N=(3,3) $wName
Wave w0 = $wName
WAVE/Z spWave
MatrixOp/O/FREE cWave = sumCols(spWave)
cWave /= 2
w0[0][] = spwave[0][q]
w0[1][] = cWave[0][q]
w0[2][] = spwave[1][q]
wName = ReplaceString("_ax", wName, "_bx")
Duplicate/O w0, $wName
// now plot out in 3D
GizPlotter(expDataFolderName)
SetDataFolder root:data:
endfor
End
/// @param folderName this is a string containing the folder in data:
Function GizPlotter(folderName)
String folderName
if(igorversion()<7)
Print "Igor 7 is needed"
Return 0
endif
WAVE/Z ThreeDVecWave
Wave colorwave = root:colorwave
String wName = "root:" + folderName + "_ax"
Wave w0 = $wName
wName = ReplaceString("_ax", wName, "_bx")
Wave w1 = $wName
// wsize of new gizmo is 35,45,550,505, so 1.8 times is
NewGizmo/N=$folderName/W=(35,45,962,873)
AppendToGizmo path=ThreeDVecWave,name=mts
ModifyGizmo modifyObject=mts, objectType=path, property={pathcolor,0,0,0,1}
ModifyGizmo setDisplayList=0,object=mts
AppendToGizmo path=w0,name=spax
ModifyGizmo modifyObject=spax, objectType=path, property={pathcolor,1,0,0,1}
ModifyGizmo setDisplayList=1,object=spax
AppendToGizmo scatter=w0,name=spspots
ModifyGizmo modifyObject=spspots, objectType=scatter, property={colorWave,colorwave}
ModifyGizmo modifyObject=spspots, objectType=scatter, property={ scatterColorType,1}
ModifyGizmo ModifyObject=spspots,objectType=scatter,property={ size,0.3}
ModifyGizmo setDisplayList=2,object=spspots
// Append the second "bx" wave
AppendToGizmo path=w1,name=spbx
ModifyGizmo modifyObject=spbx, objectType=path, property={pathcolor,0.5,0.5,0.5,1}
ModifyGizmo setDisplayList=3,object=spbx
AppendToGizmo scatter=w1,name=sbspots
ModifyGizmo modifyObject=sbspots, objectType=scatter, property={colorWave,colorwave}
ModifyGizmo modifyObject=sbspots, objectType=scatter, property={ scatterColorType,1}
ModifyGizmo ModifyObject=sbspots,objectType=scatter,property={ size,0.2}
ModifyGizmo setDisplayList=4,object=sbspots
End
Function AxisChecker()
DrawBxPanel()
End
// This is used to export the waves for use by FindingVectorsFromSkeleton.ipf
Function GetBx()
SetDataFolder root:
String wList = WaveList("*_bx",";","")
String wName
Variable nWaves = ItemsInList(wList)
Make/O/N=(nWaves)/T labelWave
Make/O/N=(nWaves,3) r_p1Wave,r_cWave,r_p2Wave
Variable i
for(i = 0; i < nWaves; i += 1)
wName = StringFromList(i,wList)
Wave w0 = $wName
Duplicate/O w0, w1
w1[][0,1] /=12 // rescale to pixels
w1[][2] /=60
wName = ReplaceString("_bx",wName,"")
labelWave[i] = wName
r_p1Wave[i][] = w1[0][q]
r_cWave[i][] = w1[1][q]
r_p2wave[i][] = w1[2][q]
endfor
KillWaves w1
Save/C labelWave,r_p1Wave,r_cWave,r_p2Wave
End
Function DrawBxPanel()
DoWindow/K CorrectAxis
NewPanel/N=CorrectAxis /W=(800,250,1100,440)
SetDrawLayer UserBack
SetDrawEnv textyjust= 2
DrawText 2,2,"Select the bx wave you\rwant to work with"
DrawLine 2,35,288,35
SetDrawEnv textyjust= 2
DrawText 2,46,"Recalculate:"
DrawLine 2,95,288,95
SetDrawEnv textyjust= 2
DrawText 2,113,"Are you finished?"
Button button0,pos={4.00,60.00},size={50.00,20.00},proc=ButtonProcP1,title="P1"
Button button0,fColor=(65535,0,0)
Button button1,pos={64.00,60.00},size={50.00,20.00},proc=ButtonProcC,title="C"
Button button2,pos={124.00,60.00},size={50.00,20.00},proc=ButtonProcP2,title="P2"
Button button2,fColor=(0,0,65535)
Button button3,pos={4.00,140.00},size={70.00,20.00},proc=ButtonProcTW,title="This wave"
Button button3,fColor=(65535,43690,0)
Button button4,pos={86.00,140.00},size={70.00,20.00},proc=ButtonProcAW,title="All waves"
Button button4,fColor=(65535,0,52428)
Button button5,pos={185.00,5.00},size={100.00,20.00},proc=ButtonProcBX,title="Pick bx wave"
Button button6,pos={213.00,60.00},size={70.00,20.00},proc=ButtonProcSO,title="Start over"
Button button6,fColor=(65535,65535,0)
End
Function PickBX()
SetDataFolder root:
DoWindow/K p1cp2
String bxName
Prompt bxName,"bx Wave",popup WaveList("*_bx",";","")
DoPrompt "Pick bx wave", bxName
Edit/N=p1cp2/W=(800,45,1160,213) $bxName
Print "Editing", bxName
if(V_flag != 0)
return -1
endif
End
//-------Button Controls----------------//
Function ButtonProcP1(ba) : ButtonControl
STRUCT WMButtonAction &ba
switch( ba.eventCode )
case 2: // mouse up
if(WinType("p1cp2")==0)
break
endif
String wName = StringFromList(0,WaveList("*_bx",";","WIN:p1cp2"))
Wave w0 = $wName
w0[0][] = w0[1][q] - (w0[2][q] - w0[1][q])
break
case -1: // control being killed
break
endswitch
return 0
End
Function ButtonProcC(ba) : ButtonControl
STRUCT WMButtonAction &ba
switch( ba.eventCode )
case 2: // mouse up
if(WinType("p1cp2")==0)
break
endif
String wName = StringFromList(0,WaveList("*_bx",";","WIN:p1cp2"))
Wave w0 = $wName
w0[1][] = (w0[0][q] + w0[2][q]) / 2
break
case -1: // control being killed
break
endswitch
return 0
End
Function ButtonProcP2(ba) : ButtonControl
STRUCT WMButtonAction &ba
switch( ba.eventCode )
case 2: // mouse up
if(WinType("p1cp2")==0)
break
endif
String wName = StringFromList(0,WaveList("*_bx",";","WIN:p1cp2"))
Wave w0 = $wName
w0[2][] = w0[1][q] + (w0[1][q] - w0[0][q])
break
case -1: // control being killed
break
endswitch
return 0
End
Function ButtonProcTW(ba) : ButtonControl
STRUCT WMButtonAction &ba
switch( ba.eventCode )
case 2: // mouse up
SetDataFolder root:
DoWindow/K p1cp2
break
case -1: // control being killed
break
endswitch
return 0
End
Function ButtonProcAW(ba) : ButtonControl
STRUCT WMButtonAction &ba
switch( ba.eventCode )
case 2: // mouse up
SetDataFolder root:
DoWindow/K p1cp2
GetBx()
break
case -1: // control being killed
break
endswitch
return 0
End
Function ButtonProcBX(ba) : ButtonControl
STRUCT WMButtonAction &ba
switch( ba.eventCode )
case 2: // mouse up
PickBX()
break
case -1: // control being killed
break
endswitch
return 0
End
Function ButtonProcSO(ba) : ButtonControl
STRUCT WMButtonAction &ba
switch( ba.eventCode )
case 2: // mouse up
if(WinType("p1cp2")==0)
break
endif
String wName = StringFromList(0,WaveList("*_bx",";","WIN:p1cp2"))
String axName = ReplaceString("_bx",wName,"_ax")
Duplicate/O $axName,$wName
break
case -1: // control being killed
break
endswitch
return 0
End
//--------------------------------------