Repositories list

• Simcyp-R-Scripts

  Public
  Simcyp R example scripts

  pbpkpbpk-modeling

  pbpkpbpk-modeling

  R

  •00 forks in certara/Simcyp-R-Scripts•44 stars in certara/Simcyp-R-Scripts•00 issues in certara/Simcyp-R-Scripts•00 pull requests in certara/Simcyp-R-Scripts•Updated Oct 19, 2026Oct 19, 2026

• mlcov

  Public
  R package for selection of covariate effects using ML

  R

  •

  GNU General Public License v3.0

  •22 forks in certara/mlcov•44 stars in certara/mlcov•00 issues in certara/mlcov•11 pull request in certara/mlcov•Updated Oct 5, 2026Oct 5, 2026

• chemaxon-python-examples

  Public
  Concrete code examples with the usage of Chemaxon Python API

  pythoncheminformaticspython3+ 3

  pythoncheminformaticspython3chemaxoncheminformatics-softwarecertara

  Jupyter Notebook

  •

  Apache License 2.0

  •00 forks in certara/chemaxon-python-examples•11 star in certara/chemaxon-python-examples•00 issues in certara/chemaxon-python-examples•11 pull request in certara/chemaxon-python-examples•Updated Sep 29, 2026Sep 29, 2026

• pyDarwin

  Public
  Python solution for the application of machine learning to Pop PK model selection.

  Python

  •

  GNU General Public License v3.0

  •66 forks in certara/pyDarwin•3232 stars in certara/pyDarwin•11 issue in certara/pyDarwin•11 pull request in certara/pyDarwin•Updated Sep 25, 2026Sep 25, 2026

• R-Certara

  Public
  R Package Development at Certara

  rr-pkgpharmacometrics+ 1

  rr-pkgpharmacometricsr-packages

  HTML

  •88 forks in certara/R-Certara•1616 stars in certara/R-Certara•00 issues in certara/R-Certara•00 pull requests in certara/R-Certara•Updated Sep 11, 2026Sep 11, 2026

• tidyvpc

  Public
  Package to Compute VPC Percentiles & Prediction Intervals Developed by Certara

  R

  •

  Other

  •1212 forks in certara/tidyvpc•1313 stars in certara/tidyvpc•88 issues in certara/tidyvpc•00 pull requests in certara/tidyvpc•Updated Aug 18, 2026Aug 18, 2026

• ggcertara

  Public
  A ggplot2 theme for Certara CSC-iDD

  HTML

  •22 forks in certara/ggcertara•44 stars in certara/ggcertara•33 issues in certara/ggcertara•00 pull requests in certara/ggcertara•Updated Jul 17, 2026Jul 17, 2026

• pmxpartabc

  Public
  An R package for parameter estimate tables

  R

  •11 fork in certara/pmxpartabc•00 stars in certara/pmxpartabc•00 issues in certara/pmxpartabc•00 pull requests in certara/pmxpartabc•Updated Jul 16, 2026Jul 16, 2026

• vachette

  Public
  A method for visualization of PMx models

  R

  •

  GNU General Public License v3.0

  •11 fork in certara/vachette•22 stars in certara/vachette•00 issues in certara/vachette•00 pull requests in certara/vachette•Updated Jun 19, 2026Jun 19, 2026

• certara_iq_advanced_topics

  Public archive
  Jupyter Notebook

  •00 forks in certara/certara_iq_advanced_topics•00 stars in certara/certara_iq_advanced_topics•00 issues in certara/certara_iq_advanced_topics•11 pull request in certara/certara_iq_advanced_topics•Updated Jun 5, 2026Jun 5, 2026

• certara_iq_getting_started

  Public archive
  Jupyter Notebook

  •00 forks in certara/certara_iq_getting_started•00 stars in certara/certara_iq_getting_started•00 issues in certara/certara_iq_getting_started•00 pull requests in certara/certara_iq_getting_started•Updated Jun 4, 2026Jun 4, 2026

• scikit-optimize-Certara

  Public
  Sequential model-based optimization with a `scipy.optimize` interface

  Python

  •

  BSD 3-Clause "New" or "Revised" License

  •555555 forks in certara/scikit-optimize-Certara•00 stars in certara/scikit-optimize-Certara•00 issues in certara/scikit-optimize-Certara•00 pull requests in certara/scikit-optimize-Certara•Updated May 29, 2026May 29, 2026

• qsp-notebook-training

  Public archive
  Hands-on training material for the Applied BioMath QSP Notebook

  Jupyter Notebook

  •

  Other

  •11 fork in certara/qsp-notebook-training•44 stars in certara/qsp-notebook-training•00 issues in certara/qsp-notebook-training•00 pull requests in certara/qsp-notebook-training•Updated Nov 14, 2025Nov 14, 2025

• certara-iq-vpop-training-1

  Public archive
  A first training project for virtual population calibration with Certara IQ

  Jupyter Notebook

  •00 forks in certara/certara-iq-vpop-training-1•00 stars in certara/certara-iq-vpop-training-1•00 issues in certara/certara-iq-vpop-training-1•00 pull requests in certara/certara-iq-vpop-training-1•Updated Oct 17, 2025Oct 17, 2025

• ADPOBenchmark

  Public
  Scripts for NLME Engine benchmarks

  nonmemnlme

  nonmemnlme

  NMODL

  •11 fork in certara/ADPOBenchmark•00 stars in certara/ADPOBenchmark•00 issues in certara/ADPOBenchmark•00 pull requests in certara/ADPOBenchmark•Updated Nov 24, 2024Nov 24, 2024

• jqm

  Public archive
  An asynchronous job manager

  Java

  •

  Apache License 2.0

  •2323 forks in certara/jqm•00 stars in certara/jqm•00 issues in certara/jqm•66 pull requests in certara/jqm•Updated Oct 22, 2024Oct 22, 2024

• nlme-performance-demo

  Public archive
  Repository containing scripts presented at public conferences for NLME performance testing and benchmarking.

  AMPL

  •00 forks in certara/nlme-performance-demo•00 stars in certara/nlme-performance-demo•00 issues in certara/nlme-performance-demo•00 pull requests in certara/nlme-performance-demo•Updated May 16, 2024May 16, 2024

• colonic-motility-qsp-model

  Public archive
  MATLAB

  •

  Other

  •11 fork in certara/colonic-motility-qsp-model•00 stars in certara/colonic-motility-qsp-model•00 issues in certara/colonic-motility-qsp-model•00 pull requests in certara/colonic-motility-qsp-model•Updated Mar 31, 2024Mar 31, 2024

• R-Style

  Public
  Certara styling utilities for R

  R

  •

  GNU General Public License v2.0

  •00 forks in certara/R-Style•00 stars in certara/R-Style•00 issues in certara/R-Style•00 pull requests in certara/R-Style•Updated Mar 7, 2024Mar 7, 2024

• mbbe

  Public
  Model Based Bioequivalence

  R

  •00 forks in certara/mbbe•00 stars in certara/mbbe•33 issues in certara/mbbe•00 pull requests in certara/mbbe•Updated Feb 1, 2024Feb 1, 2024

• scmreg

  Public
  Functions to perform SCM in R

  R

  •22 forks in certara/scmreg•33 stars in certara/scmreg•00 issues in certara/scmreg•11 pull request in certara/scmreg•Updated Jan 12, 2024Jan 12, 2024

• R-RsNLME-Examples

  Public
  RsNLME Example Scripts

  R

  •11 fork in certara/R-RsNLME-Examples•22 stars in certara/R-RsNLME-Examples•00 issues in certara/R-RsNLME-Examples•00 pull requests in certara/R-RsNLME-Examples•Updated Nov 22, 2023Nov 22, 2023

• github-action-ansible-tower-awx

  Public archive
  TypeScript

  •

  MIT License

  •11 fork in certara/github-action-ansible-tower-awx•11 star in certara/github-action-ansible-tower-awx•11 issue in certara/github-action-ansible-tower-awx•77 pull requests in certara/github-action-ansible-tower-awx•Updated Jul 19, 2023Jul 19, 2023

• pyDarwin_identifiability

  Public
  add identifiability to criteria

  Python

  •

  GNU General Public License v3.0

  •66 forks in certara/pyDarwin_identifiability•00 stars in certara/pyDarwin_identifiability•00 issues in certara/pyDarwin_identifiability•00 pull requests in certara/pyDarwin_identifiability•Updated Jun 5, 2023Jun 5, 2023

• chef

  Public archive
  Chef Infra, a powerful automation platform that transforms infrastructure into code automating how infrastructure is configured, deployed and managed across any…

  Ruby

  •

  Apache License 2.0

  •2.5k2.5k forks in certara/chef•00 stars in certara/chef•00 issues in certara/chef•00 pull requests in certara/chef•Updated Apr 17, 2023Apr 17, 2023

• ggquickeda-phoenix

  Public archive
  ggplot2 and table1 summary statistics quick exploration of data

  R

  •

  Other

  •88 forks in certara/ggquickeda-phoenix•00 stars in certara/ggquickeda-phoenix•00 issues in certara/ggquickeda-phoenix•00 pull requests in certara/ggquickeda-phoenix•Updated Mar 13, 2023Mar 13, 2023

• R-ACOP-2022

  Public archive
  Certara-R PMx package usage examples for ACOP

  HTML

  •00 forks in certara/R-ACOP-2022•00 stars in certara/R-ACOP-2022•00 issues in certara/R-ACOP-2022•00 pull requests in certara/R-ACOP-2022•Updated Oct 31, 2022Oct 31, 2022

• table1c

  Public
  R

  •11 fork in certara/table1c•11 star in certara/table1c•11 issue in certara/table1c•00 pull requests in certara/table1c•Updated Oct 5, 2022Oct 5, 2022

• RsNLME-Rmd-Report-Example

  Public
  An example of how to use RsNLME with R Markdown to efficiently prepare a report.

  HTML

  •00 forks in certara/RsNLME-Rmd-Report-Example•00 stars in certara/RsNLME-Rmd-Report-Example•00 issues in certara/RsNLME-Rmd-Report-Example•00 pull requests in certara/RsNLME-Rmd-Report-Example•Updated Mar 2, 2022Mar 2, 2022

• pmxpartab

  Public
  An R package for parameter estimate tables

  HTML

  •22 forks in certara/pmxpartab•00 stars in certara/pmxpartab•00 issues in certara/pmxpartab•00 pull requests in certara/pmxpartab•Updated Dec 22, 2021Dec 22, 2021