This example covers the use the multiple state TIS on a simple toy model. We recommend new users start by working through these notebooks because (1) these notebooks have the most detailed discussion, and (2) the systems are simple enough that the simulations can be run interactively.

This example consists of three notebooks: one to obtain initial trajectories, one to perform the TIS simulation, and one to do the analysis after.

For more advanced techniques based on the same system, see the subsequent notebooks in the directory containing these examples.

.. toctree::

    toy_model_mstis/toy_mstis_1_setup
    toy_model_mstis/toy_mstis_2_run
    toy_model_mstis/toy_mstis_3_analysis