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5.1_Start-End Plot of Unspliced Reads.R

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5.1_Start-End Plot of Unspliced Reads.R

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library(ggplot2)

library(dplyr)

library(data.table)

dfv <- fread("R Output/EILV_polyA2/Viral Spliced and Unspliced Reads/EILV_polyA2_Unspliced.csv", sep=",", header=T)

ggplot(dfv)+

geom_histogram(aes(x=refstart), binwidth=10, color="grey80")+

geom_histogram(aes(x=refend), binwidth=10, color="grey40")+

theme_bw()+

theme(axis.title.x=element_blank(),

panel.grid.minor=element_blank(),

panel.grid.major=element_blank(),

panel.background=element_blank(),

legend.position="none")