Issues

• Fix Aragorn negative coordinate issue

  gbouras13/pharokka#444 · Filter by author gbouras13 opened on Sep 17, 2026

• Bug report: Potential annotation bug after genome rotation

  gbouras13/pharokka#431 · Filter by author guluzi opened on Jul 2, 2026

• Overlapping Genes

  question
  gbouras13/pharokka#429 · Filter by author a-kaestner opened on May 28, 2026
  2

• Feature request: Change the direction of #labels to horizontal

  gbouras13/pharokka#428 · Filter by author ronepz opened on May 5, 2026

• Issue regarding negative location values.

  gbouras13/pharokka#418 · Filter by author hjgwak opened on Jan 15, 2026
  1

• Alternate coding table functionality is broken

  gbouras13/pharokka#417 · Filter by author usmanenam opened on Jan 9, 2026
  3

• Feature Request: Proteomics Data

  enhancement
  gbouras13/pharokka#367 · Filter by author linsalrob opened on Nov 13, 2024

• ValueError: Duplicate key (while no duplicated ids in input)

  bug
  gbouras13/pharokka#361 · Filter by author art-egorov opened on Oct 4, 2024
  2

• Issues with pharokka_multiplotter.py: IndexError: index -1 is out of bounds for axis 0 with size 0

  bug
  gbouras13/pharokka#348 · Filter by author aryehjc opened on Jun 24, 2024
  3

• Replace hmmscan with hmmsearch

  enhancement
  gbouras13/pharokka#330 · Filter by author valentynbez opened on Feb 9, 2024

• KeyError: 'Name contig'

  bug
  gbouras13/pharokka#327 · Filter by author SergeyBaikal opened on Feb 1, 2024
  4