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biojava
biojava
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biojava-7.2.5
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biojava-7.2.5
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biojava
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biojava-alignment
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src
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main
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java
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org
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biojava
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nbio
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alignment
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AbstractMatrixAligner.java
AbstractMatrixAligner.java
AbstractPairwiseSequenceAligner.java
AbstractPairwiseSequenceAligner.java
AbstractProfileProfileAligner.java
AbstractProfileProfileAligner.java
AbstractScorer.java
AbstractScorer.java
Aligner.java
Aligner.java
CallablePairwiseSequenceAligner.java
CallablePairwiseSequenceAligner.java
CallablePairwiseSequenceScorer.java
CallablePairwiseSequenceScorer.java
CallableProfileProfileAligner.java
CallableProfileProfileAligner.java
GapPenalty.java
GapPenalty.java
GuideTreeNode.java
GuideTreeNode.java
HierarchicalClusterer.java
HierarchicalClusterer.java
MatrixAligner.java
MatrixAligner.java
PairInProfileScorer.java
PairInProfileScorer.java
PairwiseSequenceAligner.java
PairwiseSequenceAligner.java
PairwiseSequenceScorer.java
PairwiseSequenceScorer.java
PartitionRefiner.java
PartitionRefiner.java
ProfileProfileAligner.java
ProfileProfileAligner.java
ProfileProfileScorer.java
ProfileProfileScorer.java
RescoreRefiner.java
RescoreRefiner.java
Scorer.java
Scorer.java
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