Issues

• Support of D-AminoAcids

  enhancementnew feature
  biojava/biojava#993 · Filter by author aalhossary opened on Nov 7, 2021
  7

• EMBL file parser is not parsing features

  enhancementhelp wanted
  biojava/biojava#923 · Filter by author MaxGreil opened on Mar 10, 2021
  2

• Refactor CathInstallation to support daily snapshots

  enhancement
  biojava/biojava#759 · Filter by author sbliven opened on Mar 22, 2018 · 6.1.0
  1

• OBO parser: alt_id

  bugenhancement
  biojava/biojava#694 · Filter by author tulay opened on Aug 2, 2017 · 6.1.0
  3

• Finish the implementation of BondType in the structure package

  enhancementhelp wantedlow priority
  biojava/biojava#674 · Filter by author lafita opened on Jun 29, 2017

• Reduce dependence of unit tests on external sites

  enhancementlow prioritytesting
  biojava/biojava#606 · Filter by author sbliven opened on Nov 24, 2016
  6

• Create SequenceAligner objects without specifying query and target sequences

  enhancementminor
  biojava/biojava#550 · Filter by author lafita opened on Aug 4, 2016 · 6.1.0

• Secondary structure assignment could be done taking all symmetry partners into account

  enhancementhelp wantedminor
  biojava/biojava#454 · Filter by author josemduarte opened on Apr 19, 2016
  7

• More robust SDF generation

  bugdocumentationenhancement
  biojava/biojava#435 · Filter by author abradle opened on Mar 15, 2016
  

• Generalize StructureAlignment Visualization

  enhancementnew feature
  biojava/biojava#396 · Filter by author lafita opened on Feb 1, 2016
  4

  

• Open up Symmetry visualization API (quaternary and internal)

  enhancement
  biojava/biojava#393 · Filter by author andreasprlic opened on Jan 29, 2016
  4

  

• Add support for parsing secondary structure in mmCIFF

  enhancementhelp wantedminor
  biojava/biojava#333 · Filter by author lafita opened on Sep 22, 2015 · 6.1.0
  3

• Introduction of semiglobal alignments

  enhancementhelp wantednew feature
  biojava/biojava#243 · Filter by author josemduarte opened on Jan 26, 2015
  4

  

• Better support for symmetry in the Structure model

  enhancementnew feature
  biojava/biojava#220 · Filter by author sbliven opened on Dec 12, 2014
  11

• Is there a faster usage method for the "countCompounds()" method?

  enhancement
  biojava/biojava#195 · Filter by author tolgap opened on Oct 13, 2014
  9

• Variation APIs

  enhancementnew feature
  biojava/biojava#121 · Filter by author sbliven opened on May 12, 2014
  1

• Balibase

  enhancementhelp wantednew feature
  biojava/biojava#119 · Filter by author sbliven opened on May 12, 2014
  3

• Add a SCOP2 parser

  enhancementhelp wanted
  biojava/biojava#82 · Filter by author sbliven opened on Dec 4, 2013