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1. Commits on Oct 27, 2017

   • New test for #712, thanks @larsonmattr

     josemduarte

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2. Commits on Oct 26, 2017

   • Minor bugfix and some new tests for it

     josemduarte

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3. Commits on Sep 8, 2017

   • Making it clear that the soft memory cache is a singleton

     josemduarte

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   • Fix for new tests so that they don't pollute other tests

     josemduarte

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   • Solving #704 and adding some tests for #703

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4. Commits on Aug 5, 2017

   • Merge remote-tracking branch 'upstream/master'

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     luke czapla

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5. Commits on Aug 3, 2017

   • Merge branch 'master' of github.com:biojava/biojava into serialize

     lafita

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6. Commits on Aug 2, 2017

   • Fixing test after PDB v5 remediation

     josemduarte

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7. Commits on Jul 31, 2017

   • Full sentence revision of all JavaDoc and addition of separate error checking method

     

     luke czapla

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     luke czapla

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8. Commits on Jul 28, 2017

   • Add a more complete check to structure serialization test

     lafita

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   • Make the secondary structure objects serializable

     lafita

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9. Commits on Jul 26, 2017

   • Style changes

     

     luke czapla

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     luke czapla

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   • removed SNAPSHOT from since annotation

     

     luke czapla

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     luke czapla

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   • final tests using getLength() and others

     

     luke czapla

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     luke czapla

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   • Proposed revision

     

     luke czapla

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     luke czapla

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10. Commits on Jul 25, 2017

    • Added author line and other suggestions

      

      luke czapla

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      luke czapla

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    • Added new getters and refined tests

      

      luke czapla

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    • Added new getters and refined tests

      

      luke czapla

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11. Commits on Jul 24, 2017

    • All classes moved to have an analyze() method and toString() for printing

      

      luke czapla

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12. Commits on Jul 23, 2017

    • Updated tests

      

      luke czapla

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13. Commits on Jul 22, 2017

    • finding base pairs between the same strand for hairpins

      

      luke czapla

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14. Commits on Jul 21, 2017

    • Test fix

      

      luke czapla

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    • Moved base pair code into new package basepairs

      

      luke czapla

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    • Made test use no println, and class use Logger

      

      luke czapla

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    • Base pair and base-pair step parameters

      

      luke czapla

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15. Commits on Jul 13, 2017

    • Fixing tests after PDB v5 remediation

      josemduarte

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    • Fixing test after case change in RCSB rest service

      josemduarte

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16. Commits on Jul 6, 2017

    • Uncomment release Date lines and test

      lafita

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    • Merge branch 'master' into master

      lafita

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    • Merge pull request #680 from lafita/mmcif5

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      lafita

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    • Implemented reading of mmCIF 5.0 changes in the _pdbx_database_status

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      pwrose

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17. Commits on Jun 30, 2017

    • Test parsing the release date from MMCIF

      lafita

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    • Test parsing dates from PDB format

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      lafita

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18. Commits on Jun 29, 2017

    • Test Structure serialization

      lafita

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19. Commits on Jun 21, 2017

    • Fix for large coordinates to avoid ',' grouping character in coordinates.

      

      Matt Larson

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