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Cannot stage dataflow job (java.net.SocketTimeoutException & java.io.IOException) #625

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Cannot stage dataflow job (java.net.SocketTimeoutException & java.io.IOException)#625

Description

@mastronaute
mastronaute
opened on Mar 20, 2018

I am not able to run a Dataflow job with the DataflowRunner on GCP (I tried with the WordCount example and a custom dataflow of mine, without success).

My configuration:

  • Eclipse Oxygen with Java SE 8 (1.8.0_161)

  • pom.xml (because I saw that some problem can occur while staging based on the google-api-client used):

<?xml version="1.0" encoding="UTF-8"?>
<project xmlns="http://maven.apache.org/POM/4.0.0"
    xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"
    xsi:schemaLocation="http://maven.apache.org/POM/4.0.0 http://maven.apache.org/xsd/maven-4.0.0.xsd">
  <modelVersion>4.0.0</modelVersion>

  <groupId>mro.gcp.dataflow</groupId>
  <artifactId>dataflow.test</artifactId>
  <version>0.0.1-SNAPSHOT</version>

  <properties>
    <project.build.sourceEncoding>UTF-8</project.build.sourceEncoding>
    <maven-compiler-plugin.version>3.6.2</maven-compiler-plugin.version>
    <maven-exec-plugin.version>@maven-exec-plugin.version@</maven-exec-plugin.version>
    <slf4j.version>1.7.25</slf4j.version>
  </properties>

  <repositories>
    <repository>
      <id>ossrh.snapshots</id>
      <name>Sonatype OSS Repository Hosting</name>
      <url>https://oss.sonatype.org/content/repositories/snapshots/</url>
      <releases>
        <enabled>false</enabled>
      </releases>
      <snapshots>
        <enabled>true</enabled>
      </snapshots>
    </repository>
  </repositories>

  <build>
   <plugins>
      <plugin>
        <groupId>org.apache.maven.plugins</groupId>
        <artifactId>maven-compiler-plugin</artifactId>
        <version>${maven-compiler-plugin.version}</version>
        <configuration>
          <source>1.8</source>
          <target>1.8</target>
        </configuration>
      </plugin>
    </plugins>

    <pluginManagement>
      <plugins>
        <plugin>
          <groupId>org.codehaus.mojo</groupId>
          <artifactId>exec-maven-plugin</artifactId>
          <version>${maven-exec-plugin.version}</version>
          <configuration>
            <cleanupDaemonThreads>false</cleanupDaemonThreads>
          </configuration>
        </plugin>
      </plugins>
    </pluginManagement>
  </build>

  <dependencies>
    <dependency>
      <groupId>com.google.cloud.dataflow</groupId>
      <artifactId>google-cloud-dataflow-java-sdk-all</artifactId>
      <version>[2.3.0, 2.99)</version>
    </dependency>

    <!-- slf4j API frontend binding with JUL backend -->
    <dependency>
      <groupId>org.slf4j</groupId>
      <artifactId>slf4j-api</artifactId>
      <version>${slf4j.version}</version>
    </dependency>
    <dependency>
      <groupId>org.slf4j</groupId>
      <artifactId>slf4j-jdk14</artifactId>
      <version>${slf4j.version}</version>
    </dependency>

    <dependency>
      <groupId>com.google.api-client</groupId>
      <artifactId>google-api-client</artifactId>
      <version>[1.22.0]</version>
    </dependency>
  </dependencies>
</project>

It looks like the jobs are not staged to the GCP. When running the Dataflow from Eclipse (with the DataflowRunner set) the console says "127 files to stage" and outputs all files being staged and after some time (maybe 30 seconds) 3 different errors start to show (see below). Console then continues to output files staging and then get stuck... Please help, I have already lost 3 days on this... Thanks!

Error 1:

mars 20, 2018 11:50:27 AM com.google.api.client.http.HttpRequest execute
AVERTISSEMENT: exception thrown while executing request
java.net.SocketException: Unexpected end of file from server
	at sun.net.www.http.HttpClient.parseHTTPHeader(HttpClient.java:851)
	at sun.net.www.http.HttpClient.parseHTTP(HttpClient.java:678)
	at sun.net.www.protocol.http.HttpURLConnection.getInputStream0(HttpURLConnection.java:1587)
	at sun.net.www.protocol.http.HttpURLConnection.getInputStream(HttpURLConnection.java:1492)
	at java.net.HttpURLConnection.getResponseCode(HttpURLConnection.java:480)
	at sun.net.www.protocol.https.HttpsURLConnectionImpl.getResponseCode(HttpsURLConnectionImpl.java:347)
	at com.google.api.client.http.javanet.NetHttpResponse.<init>(NetHttpResponse.java:37)
	at com.google.api.client.http.javanet.NetHttpRequest.execute(NetHttpRequest.java:94)
	at com.google.api.client.http.HttpRequest.execute(HttpRequest.java:981)
	at com.google.api.client.googleapis.media.MediaHttpUploader.executeCurrentRequestWithoutGZip(MediaHttpUploader.java:545)
	at com.google.api.client.googleapis.media.MediaHttpUploader.executeCurrentRequest(MediaHttpUploader.java:562)
	at com.google.api.client.googleapis.media.MediaHttpUploader.executeUploadInitiation(MediaHttpUploader.java:519)
	at com.google.api.client.googleapis.media.MediaHttpUploader.resumableUpload(MediaHttpUploader.java:384)
	at com.google.api.client.googleapis.media.MediaHttpUploader.upload(MediaHttpUploader.java:336)
	at com.google.api.client.googleapis.services.AbstractGoogleClientRequest.executeUnparsed(AbstractGoogleClientRequest.java:427)
	at com.google.api.client.googleapis.services.AbstractGoogleClientRequest.executeUnparsed(AbstractGoogleClientRequest.java:352)
	at com.google.api.client.googleapis.services.AbstractGoogleClientRequest.execute(AbstractGoogleClientRequest.java:469)
	at com.google.cloud.hadoop.util.AbstractGoogleAsyncWriteChannel$UploadOperation.call(AbstractGoogleAsyncWriteChannel.java:357)
	at java.util.concurrent.FutureTask.run(FutureTask.java:266)
	at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1149)
	at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:624)
	at java.lang.Thread.run(Thread.java:748)

Error 2:

mars 19, 2018 8:43:56 PM com.google.api.client.http.HttpRequest execute
AVERTISSEMENT: exception thrown while executing request
java.net.SocketTimeoutException: Read timed out
    at java.net.SocketInputStream.socketRead0(Native Method)
    at java.net.SocketInputStream.socketRead(SocketInputStream.java:116)
    at java.net.SocketInputStream.read(SocketInputStream.java:170)
    at java.net.SocketInputStream.read(SocketInputStream.java:141)
    at sun.security.ssl.InputRecord.readFully(InputRecord.java:465)
    at sun.security.ssl.InputRecord.read(InputRecord.java:503)
    at sun.security.ssl.SSLSocketImpl.readRecord(SSLSocketImpl.java:973)
    at sun.security.ssl.SSLSocketImpl.readDataRecord(SSLSocketImpl.java:930)
    at sun.security.ssl.AppInputStream.read(AppInputStream.java:105)
    at java.io.BufferedInputStream.fill(BufferedInputStream.java:246)
    at java.io.BufferedInputStream.read1(BufferedInputStream.java:286)
    at java.io.BufferedInputStream.read(BufferedInputStream.java:345)
    at sun.net.www.http.HttpClient.parseHTTPHeader(HttpClient.java:704)
    at sun.net.www.http.HttpClient.parseHTTP(HttpClient.java:647)
    at sun.net.www.protocol.http.HttpURLConnection.getInputStream0(HttpURLConnection.java:1569)
    at sun.net.www.protocol.http.HttpURLConnection.getInputStream(HttpURLConnection.java:1474)
    at java.net.HttpURLConnection.getResponseCode(HttpURLConnection.java:480)
    at sun.net.www.protocol.https.HttpsURLConnectionImpl.getResponseCode(HttpsURLConnectionImpl.java:338)
    at com.google.api.client.http.javanet.NetHttpResponse.<init>(NetHttpResponse.java:37)
    at com.google.api.client.http.javanet.NetHttpRequest.execute(NetHttpRequest.java:94)
    at com.google.api.client.http.HttpRequest.execute(HttpRequest.java:981)
    at com.google.api.client.googleapis.media.MediaHttpUploader.executeCurrentRequestWithoutGZip(MediaHttpUploader.java:545)
    at com.google.api.client.googleapis.media.MediaHttpUploader.executeCurrentRequest(MediaHttpUploader.java:562)
    at com.google.api.client.googleapis.media.MediaHttpUploader.resumableUpload(MediaHttpUploader.java:419)
    at com.google.api.client.googleapis.media.MediaHttpUploader.upload(MediaHttpUploader.java:336)
    at com.google.api.client.googleapis.services.AbstractGoogleClientRequest.executeUnparsed(AbstractGoogleClientRequest.java:427)
    at com.google.api.client.googleapis.services.AbstractGoogleClientRequest.executeUnparsed(AbstractGoogleClientRequest.java:352)
    at com.google.api.client.googleapis.services.AbstractGoogleClientRequest.execute(AbstractGoogleClientRequest.java:469)
    at com.google.cloud.hadoop.util.AbstractGoogleAsyncWriteChannel$UploadOperation.call(AbstractGoogleAsyncWriteChannel.java:357)
    at java.util.concurrent.FutureTask.run(FutureTask.java:266)
    at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1142)
    at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:617)
    at java.lang.Thread.run(Thread.java:745)

Error 3:

mars 19, 2018 9:41:46 PM com.google.api.client.http.HttpRequest execute
AVERTISSEMENT: exception thrown while executing request
java.io.IOException: insufficient data written
    at sun.net.www.protocol.http.HttpURLConnection$StreamingOutputStream.close(HttpURLConnection.java:3540)
    at com.google.api.client.http.javanet.NetHttpRequest.execute(NetHttpRequest.java:81)
    at com.google.api.client.http.HttpRequest.execute(HttpRequest.java:981)
    at com.google.api.client.googleapis.media.MediaHttpUploader.executeCurrentRequestWithoutGZip(MediaHttpUploader.java:545)
    at com.google.api.client.googleapis.media.MediaHttpUploader.executeCurrentRequest(MediaHttpUploader.java:562)
    at com.google.api.client.googleapis.media.MediaHttpUploader.resumableUpload(MediaHttpUploader.java:419)
    at com.google.api.client.googleapis.media.MediaHttpUploader.upload(MediaHttpUploader.java:336)
    at com.google.api.client.googleapis.services.AbstractGoogleClientRequest.executeUnparsed(AbstractGoogleClientRequest.java:427)
    at com.google.api.client.googleapis.services.AbstractGoogleClientRequest.executeUnparsed(AbstractGoogleClientRequest.java:352)
    at com.google.api.client.googleapis.services.AbstractGoogleClientRequest.execute(AbstractGoogleClientRequest.java:469)
    at com.google.cloud.hadoop.util.AbstractGoogleAsyncWriteChannel$UploadOperation.call(AbstractGoogleAsyncWriteChannel.java:357)
    at java.util.concurrent.FutureTask.run(FutureTask.java:266)
    at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1142)
    at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:617)
    at java.lang.Thread.run(Thread.java:745)

Activity

  1. mastronaute commented on Mar 20, 2018

    @mastronaute
    mastronaute
    on Mar 20, 2018
    Author

    FYI, I have been able to stage the exact same jobs through a compute engine instance. Could this be related to network latency?

  2. lukecwik commented on Mar 21, 2018

    @lukecwik
    lukecwik
    on Mar 21, 2018
    Contributor

    This seems to be a networking latency/reliability issue between your host and GCP.

    Have you looked at utilities like netstat/trace route/ping to look to see if you can find an issue along the route?

  3. mastronaute commented on Mar 21, 2018

    @mastronaute
    mastronaute
    on Mar 21, 2018
    Author

    Indeed it looks like it is related to networking latency. I manage to upload the exact same jobs through a compute engine.

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