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# Distributed-Something
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Run encapsulated docker containers that do... something in the Amazon Web Services (AWS) infrastructure.
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We are interested in scientific image analysis so we have used it for [CellProfiler](https://github.com/DistributedScience/Distributed-CellProfiler), [Fiji](https://github.com/DistributedScience/Distributed-Fiji), and [BioFormats2Raw](https://github.com/DistributedScience/Distributed-OmeZarrCreator).
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You can use it for whatever you want!
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# Distributed-Collate
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Run encapsulated docker containers that run [pycytominer](https://github.com/cytomining/pycytominer)'s collation utility in the Amazon Web Services (AWS) infrastructure.
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## Documentation
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Full documentation is available on our [Documentation Website](https://distributedscience.github.io/Distributed-Something).
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We have a fully-functional minimal example of a Distributed-Something application available at [Distributed-HelloWorld](https://github.com/DistributedScience/Distributed-HelloWorld).
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Full documentation of the parent Distributed-Something application is available on its [Documentation Website](https://distributedscience.github.io/Distributed-Something).
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Documentation here is a WIP.
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## Overview
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This code is an example of how to use AWS distributed infrastructure for running anything Dockerized.
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This repo Docker-izes and parallelizes the collation step needed between CellProfiler cluster outputs and the data transformations available with pycytominer.
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The configuration of the AWS resources is done using boto3 and the AWS CLI.
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The worker is written in Python and is encapsulated in a Docker container.
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There are four AWS components that are minimally needed to run distributed jobs:

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